Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0182 ATGGCGGATGAGGAGCCAGTAAGCGGGAGGCGGAGGCCGAGGGGACCGGAGTCCACCGTCCGCAGCGAAGCGTTGGAGCGTCTCAAGGCCCGCCTCCGTGGCGGTCGTCGGTCCGACGGCACTGGGCCCCAAATCAGGTTAGAGAACCCTGTCTATGACACTGTCCCCGAGGACGAGTACAACGCCCTCGTCGCCAAGCGCCGCGAGCAGGCGCGCTCCTTCATAGTCGACGATGAAGGAATTGGATACGGTGATGAGGGTGAGGAAGAGGACTGGTCTCAAGCCGGATACACTCTCTCCTCCGATGAATCCGAAGGAGAATCGGAGAGGCCGAAGCGGAAAAAGATCGAGAAGAAGGATCCCCAGCCGAAACGACCTTCTTCGTCGCTCTCCGCCGCTGCGACCATGATGGGAGGGCAGAGATTGTCCTCCATGTTCACTTCCTCCGTTTTCAAGAAGAGCAGAGACGACAAAGTCTCCGAGAGCATCGTCGACGATGTTATCGCGGAGTTCGCTGCAGACGAGACTGATAGACTGAGGCGGAGAAGGGCGCAAGGGAATTCCTCTTCCACTTCCGACGCAAACAATGCTTTGCGTGTTAATAATACGTTTAGGGATAATCCTTCTGTTGATACACTGACAGCTTTTTCTTCGTTGCCGGAACATTGTAACGCTGAGTCTGTTAAGGTAGTTGTTGAGAGTGATGGTTTTGATTCGGGGTTTGAGCAAAAGAGCGAGGTGGTTCATGAAATGGAAGATTTCGGGCGTGGTAGTTCTGAAAATGGACAGGCACAGATGGTGGGAGCTGATGAATGTCAAATTATTGAATGCTTGGTTAAGGAGAAAGATGTGAATAGTTTTGAAATTGAAGTGATAGCGGATGCGAAAAAGGAGGTATTCACTTTGAACGCGAAGGTTAATAAAGAGGAGGACCCTGCATTGTCTGCGACTGCTGGTTGGAAGGAAGCAATACGCGGTGCTGGTGGGGTTGATGTTACTGATTCGAAGGATGCTTGGCAGAACCAGCAACTCTCAGAGTTTGATCTGGAGGAAGATGGATCACTGCCTTTCTATATATTAGATGCCTACGAGGAGTTTTATGGGGAAAATAGGGGCACCCTCTATCTGTTTGGGAAGGTTAAAACAGGGGATTTGTATCAGAGTTGCTGTGTTATTGTGAAGAGCATGCAAAGGTGTGTCTATGCAGTTCCTACCCAACCTTTGCATCGCACTGAAGGGATGACGAGTCTCGAGAGAGATTTTCAGGAGTCTCGAATTTCTTCTGCGGATTTCTTTAAAAAGCTGCAAGATGCAGTATCGGATGTTAAGAATGAGATAGCACAGCATTTGGTGAATATCGAAGTTTCGAACTTTAGCATGGCACCTGTTAAGAGAAAATATGCATTTGATCGATTTGAAATCCCTGCAGGTGAAAATTATGTGGTGAAAATCAATTATTCATTCAAGGATCCTGTACTTCCAGCAGATCTCAAAGGAGAAAGTTTCTGTGCTCTCTTAGGAACTAGTTGCAGTGCCCTTGAGCTTTTTCTGATTAAACGGAAGATAAAGGGGCCTTCATGGCTACAGGTTTCAAAGTTTGCTACGAGCTCATCTTCCCGAAGGGTTAGCTGGTGCAAATTTGAAGTGACCGTTGACTCTCCTAAAAACATAAGGACTTCAGCTCCTTCAAAAATCACTTCTAAGATTCCTCCAGTGGTTGTTGCAGCAATAAACTTGAAAACCACCTTAAATGAAAAGCAGAACATTAATGAGATTGTATCAGCATCCATTGTCTCTTGTAACATGGTTAAGATTGATACCCCTATGATGGCTTCAGAGTGGAGGAGACCCGGAAGGCTGACCCATTTTACTGTTGTTCGTAAACTTGATGGGAGTATATTTCCCATGGGATTCAACAAGGAGGTTACGGACAGAAACTTAAAAGCTGGTTCAAATATTCTGTGTGCTGAAAGCAGTGAAAGAGCTTTGTTGAACCGCTTGATGTTAGAATTGCACAAGTTGGATAGCGATGTTCTTGTTGGACATAATATATCTGGATTTGACCTGGATGTTCTTCTCCACAGATCCCAGGCTTGCAAAGTAGCAAGCAGCATGTGGTCTAAACTAGGCCGCCTCAACCGATCGACAATGCCTAAACTTGGAAGAAGAAGTAAGGTTTTTGGTTCTGGAGCAGATCCTGGTATCATGTCATGCATTGCAGGCCGGCTTCTCTGTGATACATATTTGTGTTCCCGTGACCTATTACAGGAGGTTAGTTATTCTTTAAGTCACCTTGCAAAATCACACCTGAACAAATTTCGGAAGGAAGTTGCTCCACATGAAGTTCCAAAAATGTTCCAATCAGCAGAATCGCTAATGGAGCTTATTGAATACGGTGAAACAGATGCATGGTTGTCTATGGAACTGATGTTTTATTTAAGTATTCTTCCACTCACGCGTCAGCTGACTAATATAAGTGGTAATCTGTGGGGCAAAACTCTTCAGGGTGCTCGAGCACAGAGAGTTGAATATCTTTTGCTGCATACTTTCCATGCAATGAAATATATGGTGCCAGACAAGTTCTCAAACTATTCTAAAGAAACAAAATTGACTAAACGTAGAGTAACTAATGATATCGAGGATAGCAACTATGATGTAGATATTGACAATGATGCTTCTGAAGCTGATAATAAGAAAAGCAAAAAGGGCCCTTCGTATGCCGGGGGACTGGTTTTGGAGCCAAAGAAGGGTCTTTATGACAAATATATACTGCTTCTGGATTTCAACAGTCTTTATCCTTCTATTATTCAGGAATACAATATCTGCTTTACAACTGTGGAAATATCTTTGGACGGATCTTTTCCACGTCTACCATCTTGTAAAACTACTGGAGTCTTGCCAGAGGTGCTGAAAAATCTTGTCGATAGGAGGAAGAAGGTAAAGTCATGGATAAAGAATGAAAAAAAGAAGAATGAAAAAGCTGATCCTATTAGAGTTCAGCAACTAGATATTCAGCAGCAAGCACTTAAGCTTACTGCAAACAGTATGTATGGGTGCCTGGGATTTTCCAGTTCAAGATTTTATGCTAAGCCTTTGGCTGAGCTCATTACTTTACAAGGAAGGGAAATACTGCAGAGTACTGTTGATTTAGTTCAGAATGTCTTGAATTTAGAGGTGATCTATGGCGATACTGATTCAATAATGATTTACAGTGGGCTAGATGATATTGAGGAAGCTAATAAAATTGCTGTAAAAGTTATTCAAGAGGTCAATAAGAAATATAAATGCTTGGAAATTGATCTTGATGGTTTATATAAAAGGATGCTGCTTCTCAAGAAAAAAAAGTATGCAGCTGTGAAGTTGTTGTTTAAAGATGGCATCCCATATGAGGTTATTGAACGTAAAGGTCTTGACATTGTTCGTCGCGACTGGAGCTTATTAGCTAAAGAATTAGGAGATTTTTGCTTGACTCAAATTTTGTCCGGAGGATCATCTGAAGATGTAGTGGAGTCAATCCACAACTCTCTCATGAAGGTACAAGAAGAAATGAGGAATGGACAAGTACCATTGGAGAAATATGTCATTACGAAGACATTGACTAAGCCTCCTGAAGCTTATCCTGATGCCAAGAACCAGCCACATGTTCTTGTGGCACAAAGATTGAAGCAACAAGGTTACACTTCTGGCTGCTCTGTTGGTGATACAATCCCTTATATAATTTGCCATGAGCAGGGTGGTAGTTCAGGCAGTGCAGGTGGCATTGCTCAACGTGCTAGACATCCTGATGAACTTAAACAGGAACAAGGGACATGGCTGATTGACATTGATTACTATTTATCACAACAGATCCATCCCGTCGTATCACGTCTTTGTGCATCAATTCAGGGAACAAGCCCAGAAAGACTGGCTGATTGCTTAGGGCTTGACTCGTCAAAGTTTCATCATAAATCAAGTGAAGCTTTTAATGATGATTCTAGAAATGCACTCTTGTGCGCTGCTAATGATGAGGAGAGGTATCAGGGATGTGAGCCCTTGGTCCTGTCATGCCCCAGCTGCTCTGGTACATTTGACTGCCCACCCGTCTTTAAATCTATTTGCGGTTTGTTGGGAAGTGAAAGGCCAACCAGCGTATCCCCGGAGGAATCTGACTACAATTTCTGGCGTAAGCTGTGTTGTCCTAAATGCCCAGAAGATGTTAAAATTTCTCCTGCGATGATAGCTAATCAGGTCAAAAGGCAAGCGGAGATGTTTGTTTTGATGTACTATAGAGGTTTACTAATGTGTGATGATGAAACGTGTAAGCATACAACGCGAAGTATCAGCCTTCGGTTGGTTGGTGATTCTGAGAGAGGAACTGTTTGTCCAAATTATCCTCGCTGCAATGGCCGTCTGCTTAGAAAGTACACTGAAGCGGACTTGTACAAGCAGCTCTCATATTTTTGCCATGTGTTTGACACTGCTTCTTGTATAGAAAAGATGGAGGCCAAATCTAGAATAACGATAGAGAAAGAGGTGATCAAAATTAGGCCGATGATTGATCCAGCAGCTTCAACAGCACAGAAGATCAGGGACCGTTGTGCCTTTGGGTGGGTGAGACTGGAGGATCTGGTCATTACAGTTTAA 4623 0.4369 MADEEPVSGRRRPRGPESTVRSEALERLKARLRGGRRSDGTGPQIRLENPVYDTVPEDEYNALVAKRREQARSFIVDDEGIGYGDEGEEEDWSQAGYTLSSDESEGESERPKRKKIEKKDPQPKRPSSSLSAAATMMGGQRLSSMFTSSVFKKSRDDKVSESIVDDVIAEFAADETDRLRRRRAQGNSSSTSDANNALRVNNTFRDNPSVDTLTAFSSLPEHCNAESVKVVVESDGFDSGFEQKSEVVHEMEDFGRGSSENGQAQMVGADECQIIECLVKEKDVNSFEIEVIADAKKEVFTLNAKVNKEEDPALSATAGWKEAIRGAGGVDVTDSKDAWQNQQLSEFDLEEDGSLPFYILDAYEEFYGENRGTLYLFGKVKTGDLYQSCCVIVKSMQRCVYAVPTQPLHRTEGMTSLERDFQESRISSADFFKKLQDAVSDVKNEIAQHLVNIEVSNFSMAPVKRKYAFDRFEIPAGENYVVKINYSFKDPVLPADLKGESFCALLGTSCSALELFLIKRKIKGPSWLQVSKFATSSSSRRVSWCKFEVTVDSPKNIRTSAPSKITSKIPPVVVAAINLKTTLNEKQNINEIVSASIVSCNMVKIDTPMMASEWRRPGRLTHFTVVRKLDGSIFPMGFNKEVTDRNLKAGSNILCAESSERALLNRLMLELHKLDSDVLVGHNISGFDLDVLLHRSQACKVASSMWSKLGRLNRSTMPKLGRRSKVFGSGADPGIMSCIAGRLLCDTYLCSRDLLQEVSYSLSHLAKSHLNKFRKEVAPHEVPKMFQSAESLMELIEYGETDAWLSMELMFYLSILPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHTFHAMKYMVPDKFSNYSKETKLTKRRVTNDIEDSNYDVDIDNDASEADNKKSKKGPSYAGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVEISLDGSFPRLPSCKTTGVLPEVLKNLVDRRKKVKSWIKNEKKKNEKADPIRVQQLDIQQQALKLTANSMYGCLGFSSSRFYAKPLAELITLQGREILQSTVDLVQNVLNLEVIYGDTDSIMIYSGLDDIEEANKIAVKVIQEVNKKYKCLEIDLDGLYKRMLLLKKKKYAAVKLLFKDGIPYEVIERKGLDIVRRDWSLLAKELGDFCLTQILSGGSSEDVVESIHNSLMKVQEEMRNGQVPLEKYVITKTLTKPPEAYPDAKNQPHVLVAQRLKQQGYTSGCSVGDTIPYIICHEQGGSSGSAGGIAQRARHPDELKQEQGTWLIDIDYYLSQQIHPVVSRLCASIQGTSPERLADCLGLDSSKFHHKSSEAFNDDSRNALLCAANDEERYQGCEPLVLSCPSCSGTFDCPPVFKSICGLLGSERPTSVSPEESDYNFWRKLCCPKCPEDVKISPAMIANQVKRQAEMFVLMYYRGLLMCDDETCKHTTRSISLRLVGDSERGTVCPNYPRCNGRLLRKYTEADLYKQLSYFCHVFDTASCIEKMEAKSRITIEKEVIKIRPMIDPAASTAQKIRDRCAFGWVRLEDLVITV* 1541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0182 1540 Coils Coil 1073 1107 - -
Pvu2g0182 1540 SMART polmehr3 570 1073 IPR006172 GO:0000166|GO:0003676|GO:0003887
Pvu2g0182 1540 TIGRFAM pol2: DNA polymerase (pol2) 51 1291 - -
Pvu2g0182 1540 Gene3D DNA Polymerase alpha, zinc finger 1332 1525 IPR038256 -
Pvu2g0182 1540 MobiDBLite consensus disorder prediction 103 124 - -
Pvu2g0182 1540 Pfam DNA polymerase alpha subunit p180 N terminal 25 92 IPR024647 -
Pvu2g0182 1540 Gene3D - 397 523 - -
Pvu2g0182 1540 MobiDBLite consensus disorder prediction 74 132 - -
Pvu2g0182 1540 Pfam DNA Polymerase alpha zinc finger 1333 1536 IPR015088 GO:0003887|GO:0006260
Pvu2g0182 1540 MobiDBLite consensus disorder prediction 1 36 - -
Pvu2g0182 1540 SUPERFAMILY Ribonuclease H-like 458 851 IPR012337 -
Pvu2g0182 1540 ProSitePatterns DNA polymerase family B signature. 1061 1069 IPR017964 GO:0000166|GO:0003676
Pvu2g0182 1540 Pfam DNA polymerase family B, exonuclease domain 387 763 IPR006133 -
Pvu2g0182 1540 CDD DNA_polB_alpha_exo 570 821 - -
Pvu2g0182 1540 Pfam DNA polymerase family B 829 1293 IPR006134 GO:0000166|GO:0003677
Pvu2g0182 1540 SUPERFAMILY DNA/RNA polymerases 897 1309 IPR043502 -
Pvu2g0182 1540 Gene3D Helix hairpin bin 968 1019 - -
Pvu2g0182 1540 CDD POLBc_alpha 899 1309 IPR045846 GO:0003887|GO:1902975
Pvu2g0182 1540 Gene3D - 357 556 - -
Pvu2g0182 1540 PANTHER DNA POLYMERASE ALPHA CATALYTIC SUBUNIT 17 1538 - -
Pvu2g0182 1540 Gene3D Palm domain of DNA polymerase 892 1122 IPR023211 -
Pvu2g0182 1540 PRINTS DNA-directed DNA-polymerase family B signature 923 936 IPR006172 GO:0000166|GO:0003676|GO:0003887
Pvu2g0182 1540 PRINTS DNA-directed DNA-polymerase family B signature 1006 1018 IPR006172 GO:0000166|GO:0003676|GO:0003887
Pvu2g0182 1540 PRINTS DNA-directed DNA-polymerase family B signature 1059 1067 IPR006172 GO:0000166|GO:0003676|GO:0003887
Pvu2g0182 1540 Gene3D - 1137 1324 IPR042087 -
Pvu2g0182 1540 MobiDBLite consensus disorder prediction 1 54 - -
Pvu2g0182 1540 Gene3D - 570 885 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0182 Pvu-Chr2 1964994 1976685 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0182 2 1538 Core DNA Replication Machinery Family AT5G67100 59.898 0.0 1798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0182 K02320 - gmx:100798779 2619.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0182 2 1964994 1976685 Pvu2g0182 2 1964994 1976685 ECH