Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0180 ATGCCCGATCAGTCGAGCAGCGGCGCGATGAACGACCAGCTCTCCAACCCCACCTCCATCTTTGGCCTCCGTCTCTGGGTGGTGCTTGGCGTGTGTGTCGGCGCCGCCATCGTCCTCATCCTCTTCCTCATATCCGTCTGGGTGGCCTTCAAGCGCTCCAAAGCCAACCCCGTTTCCATCCCCGATGTCTCCAAGGAGATCCAAGAAATCAGGGTCGACCACGCCCCCATCACCAACCCGACCCACCAACCCGACCCTTTTCCGGAACCTGACCCAGTTCCGCCTACCGAGGAAGAAACCAACCCCCTCAGCTACCACAGAATCCAGTTCGAGATTGGGAAGAACCACCGAATTTCCTACCCCGAACGTGCCTTGCTTCGCTCATCTTCCAACGACCCTTCCAGTGCTGAGGCTCGCCTCCTCGATCAGGTTCCCACTGTCATTCCCGAAGTTTCTCACTTGGGCTGGGGCCACTGGTACACTCTCCGGGAGCTTGAGGATTCCACCAACGCCTTTGCCCCTGAGAATGTTATTGGCGAAGGAGGTTATGGAATTGTTTATCACGGTATCTTGAACGACAATACTCATGTTGCCATTAAGAATTTGCTCAATAACAGGGGGCAAGCTGAGAAGGAGTTTAAGGTGGAAGTGGAAGCTATAGGACGAGTTCGCCACAAGAATTTAGTGAGGTTGCTTGGTTATTGTGCTGAAGGAGCTCATAGAATGCTTGTTTATGAGTTTGTCGACAATGGTAACTTGGAGCAGTGGCTGCATGGGGATGTTGGGCCTTACAGTCCTCTAACATGGGAAATTCGAATGAACATTATTCTGGGAACGGCTAAAGGGCTAACTTATCTACACGAGGGGTTGGAACCAAAAGTTGTTCACCGTGATATTAAATCAAGCAACATTTTGCTCAGTAAGCAGTGGAATGCAAAGGTCTCAGACTTTGGCCTCGCCAAACTCCTTGGCTCTGACAACAGTTATATTACCACCCGTGTCATGGGTACTTTTGGATATGTTGCTCCTGAATATGCAAGTACTGGCATGTTGAATGAACGAAGTGATGTTTATAGTTTTGGAATTCTTATTATGGAAGTTCTTACAGGAAGGAACCCTGTTGATTATAGTCGGCCTCCAGAAGAGGTGAATTTAGTTGACTGGCTCAAGAAGATGGTTAGTAACAGAAATCCAGAGGGGGTCCTGGATCCCAAGCTTCCTGAGAAACCAACTTCAAGGGCACTAAAACGAGCCCTTCTTGTAGCCTTACGTTGCACTGATCCTAATGCACAGAAGCGACCTAAAATGGGGCATGTGATACACATGCTTGAAGCTGAAGATTCCCCTTACAAAGAGGATCGCAGAGCTAGAAGGGAAGCAGGACATTCACCAAATGATAGAGTAGGGGATGGGTTGAAAGAGGAGGCAGCTGTATCAGTTGATGATGGCAAAGTTGAAAACGGGATGTGTGTCAATGAGACAAGAACGAACCCTCAAATAGAAACGCAATAA 1512 0.4907 MPDQSSSGAMNDQLSNPTSIFGLRLWVVLGVCVGAAIVLILFLISVWVAFKRSKANPVSIPDVSKEIQEIRVDHAPITNPTHQPDPFPEPDPVPPTEEETNPLSYHRIQFEIGKNHRISYPERALLRSSSNDPSSAEARLLDQVPTVIPEVSHLGWGHWYTLRELEDSTNAFAPENVIGEGGYGIVYHGILNDNTHVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEFVDNGNLEQWLHGDVGPYSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLSKQWNAKVSDFGLAKLLGSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVLTGRNPVDYSRPPEEVNLVDWLKKMVSNRNPEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEDRRARREAGHSPNDRVGDGLKEEAAVSVDDGKVENGMCVNETRTNPQIETQ* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0180 503 PANTHER RECEPTOR-LIKE KINASE PLANT 5 493 - -
Pvu2g0180 503 MobiDBLite consensus disorder prediction 81 97 - -
Pvu2g0180 503 Gene3D Phosphorylase Kinase; domain 1 151 247 - -
Pvu2g0180 503 ProSiteProfiles Protein kinase domain profile. 172 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0180 503 PANTHER OS01G0323000 PROTEIN 5 493 - -
Pvu2g0180 503 SUPERFAMILY Protein kinase-like (PK-like) 148 444 IPR011009 -
Pvu2g0180 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 294 306 IPR008271 GO:0004672|GO:0006468
Pvu2g0180 503 Pfam Protein kinase domain 175 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0180 503 MobiDBLite consensus disorder prediction 444 503 - -
Pvu2g0180 503 SMART serkin_6 172 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0180 503 MobiDBLite consensus disorder prediction 444 481 - -
Pvu2g0180 503 ProSitePatterns Protein kinases ATP-binding region signature. 178 200 IPR017441 GO:0005524
Pvu2g0180 503 MobiDBLite consensus disorder prediction 75 100 - -
Pvu2g0180 503 Gene3D Transferase(Phosphotransferase) domain 1 248 460 - -
Pvu2g0180 503 CDD STKc_IRAK 178 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0180 Pvu-Chr2 1948138 1951288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0180 153 444 Receptor kinase-like Gene Family AT4G02010 46.801 1.11e-86 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pvu2g0180 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0180 - - gmx:100797726 907.516