Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0174 ATGGCGTCGAAGCCTTCGCCTTCGCCCTCTTCTTCCAGATCGGAGCTCATCATCGATCCTTCCGGTGACAAAGTGGACGCTGTTAGTCAGACTGTTAAAGATGTGTTGCCGGTTATTGATTCTTTAAAGAAACAAGTTGCCGTGGAACGGATTGTTTATGTAAAGAATAGAATAGAGGAAAACAGACTGAAGCTGGTTGGTGTCACAAATCATGTCTGCAAAATGGCAATGGAGAGAAGGAACATCAGCGTTGGTGATTCTAACAGAAGTCTAGACCTGCTTACAAAGAGGCAAAAAGATGCAATTGATATGCACAATGGTGTTCATGCAAGTAACGGTGATGTAGAGAGCAATGGCTATCATGAAGATAGCCATGGTTCTACAGCAGTTCTTCTAGGGTCTAACGTTGCTGTTAAGAATGCTGTTCGTCCAATCAAATTGCCTGAAATAAAAAAGTTGCCTCCTTATACTACGTGGATATTTCTGGATAGAAATCAAAGAATGACTGAGGATCAGTCAGTTGTAGGCCGAAGACGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATATGCAGTGACAGTGAGGAGGAAATTATGGAGGATGAAGAGGAGAAAAGAGAATTTATAGAATCTGAAGATTATATACTTCGTATGACTGTCAAAGAATTTGGTTTAACTGACAACGTTATGGAGTCATTGGCTCAGTGCTTTTCTAGGAATACTAATGAAATTAAGGCAAGGTATGAAGCTCTTAGTATTCATCAAGACAATGCTGATGGGTCTTCAAAGGCTGTAGATTCTGTAGAGAATTCTCAGACTGGCAATTCTTTTCTGGAAAAGGATCTTGAAGCCGCTCTTGACTCTTTTGACAACCTCTTTTGTCGACGATGTCTTGTTTTTGATTGTAGATTACATGGATGTTCACAGGATCTTGTCTTCCCTGCTGAGAAGCAACCTATATGGATCCCTCCTGATAGTGAAAATGCACCCTGTGGGCCAAATTGTTTCCGATCGGTGCTTAAGTCTGAACGATTTGCCAAAACATCTTCTGCCCAGGCTGATGGTGAAGATAAGTGCTCTGGTGGCGTTTTATCTAGGAAAAAGCCTTCTACTAAAAGGCGGGTAAAAGGAAGCCAAAGTGAAAGTGCTTCATCTAATGCAAAAAACATTTCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGAGATGCTGTTTCAGCATCTCACTCAGCTCCTCCTAAAACTAAATCTGCGGGGAAAGCTGGAATTGGTAAGAGGAACAGTAAGCGAGTGGCAGAACGAGTCTTAGTCTGCATGCAGAAAAGGCAGAAGAAAACAATGGTTTCTGATTCTGATTCCATTAGTGAAGCTCTTGAGCGTTCATCAAATGATTTGGTCACTGATCAACATGCTATGAGCAGTGAAGACAAGACAAGGAAAGAAGATTTTGTAGATGACAACGTTTGTAAACAAGAAATCATAGACAATAAATCTTGGAAAGCTCTTGAAAAGGGGCTTTTAGAGAAAGGAATGGAGATTTTTGGTAGAAACAGTTGCTTAATAGCTAGGAATCTATTAAATGGTCTAAAGACTTGTTGGGATGTTTTCCAATACATAAATTGTGAAGATGGAAAGATGTCTGGTCCTCCTGGGGATGTTGCAAATTCCCTTTTGGAAGGCTATTCCAAGGGTAATAATGAAGTGAGAAGAAGGTCTAGGTTCTTACGTAGAAGAGGAAGAGTCCGTCGATTGAAGTACACCTGGAAATCTGCTGCTTATCATTCTATCAGGAAAAGGATTACAGAGAGAAAGGATCAACCCTGTCGGCAGTATAATCCATGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGCTCCTGTCTTCTTAATGGAACCTGTTGTGAGAAGTACTGTGGATGCCCCAAGAGCTGCAAGAATCGATTTCGTGGCTGTCATTGTGCTAAGAGTCAATGCCGAAGTCGTCAATGTCCATGCTTTGCCGCAGATAGGGAATGTGATCCAGATGTCTGTAGGAATTGTTGGGTCAGTTGCGGCGATGGTTCTCTTGGGATTCCTAGCCAACGAGGGGACAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATGTATCAGGCTGGGGAGCCTTCTTAAAGAATAGTGTTGGTAAACATGAATACCTTGGAGAGTATACAGGAGAGTTAATTTCTCATCGGGAAGCAGACAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTGTTTAATTTGAATGATCAGTTCGTTCTTGATGCTTACCGAAAGGGTGATAAATTGAAGTTTGCGAACCATTCGCCCGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCTGGAGATCATAGGGTAGGCATTTTTGCGAAGGAACGGATTTGCGCCGGGGAGGAACTGTTCTATGATTATCGTTATGAGCCCGATAGGGCCCCTGCCTGGGCTCGGAAGCCTGAAGCATCTGGGTCCAAAAAAGAGGACGGGGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2586 0.4234 MASKPSPSPSSSRSELIIDPSGDKVDAVSQTVKDVLPVIDSLKKQVAVERIVYVKNRIEENRLKLVGVTNHVCKMAMERRNISVGDSNRSLDLLTKRQKDAIDMHNGVHASNGDVESNGYHEDSHGSTAVLLGSNVAVKNAVRPIKLPEIKKLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIMEDEEEKREFIESEDYILRMTVKEFGLTDNVMESLAQCFSRNTNEIKARYEALSIHQDNADGSSKAVDSVENSQTGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPIWIPPDSENAPCGPNCFRSVLKSERFAKTSSAQADGEDKCSGGVLSRKKPSTKRRVKGSQSESASSNAKNISESSDSENGPGRDAVSASHSAPPKTKSAGKAGIGKRNSKRVAERVLVCMQKRQKKTMVSDSDSISEALERSSNDLVTDQHAMSSEDKTRKEDFVDDNVCKQEIIDNKSWKALEKGLLEKGMEIFGRNSCLIARNLLNGLKTCWDVFQYINCEDGKMSGPPGDVANSLLEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCSCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGSLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERICAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0174 861 SMART set_7 712 833 IPR001214 GO:0005515
Pvu2g0174 861 ProSiteProfiles CXC domain profile. 598 697 IPR026489 -
Pvu2g0174 861 Gene3D SET domain 612 829 IPR046341 -
Pvu2g0174 861 MobiDBLite consensus disorder prediction 351 429 - -
Pvu2g0174 861 MobiDBLite consensus disorder prediction 835 861 - -
Pvu2g0174 861 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 861 IPR025778 GO:0031519
Pvu2g0174 861 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 14 459 IPR045318 GO:0006338|GO:0018024
Pvu2g0174 861 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 461 859 IPR045318 GO:0006338|GO:0018024
Pvu2g0174 861 MobiDBLite consensus disorder prediction 835 854 - -
Pvu2g0174 861 SMART CXC_2 646 683 IPR033467 -
Pvu2g0174 861 Pfam SET domain 723 826 IPR001214 GO:0005515
Pvu2g0174 861 ProSiteProfiles SET domain profile. 712 827 IPR001214 GO:0005515
Pvu2g0174 861 CDD SET_EZH 712 828 - -
Pvu2g0174 861 SUPERFAMILY SET domain 615 830 IPR046341 -
Pvu2g0174 861 Coils Coil 193 213 - -
Pvu2g0174 861 MobiDBLite consensus disorder prediction 1 22 - -
Pvu2g0174 861 MobiDBLite consensus disorder prediction 1 17 - -
Pvu2g0174 861 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 14 459 - -
Pvu2g0174 861 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 461 859 - -
Pvu2g0174 861 MobiDBLite consensus disorder prediction 377 404 - -
Pvu2g0174 861 Pfam CXC domain 650 681 IPR041355 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0174 Pvu-Chr2 1899035 1909156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0174 701 830 C2H2 Transcription Factor Family AT2G23740 27.211 9.66e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu2g0174 SET 8.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0174 - K11430 gmx:100799832 1548.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0174 2 1899035 1909156 Pvu2g0174 2 1899035 1909156 ECH