Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu2g0171 | ATGTGGGATCTGAATGACTCTCCCGATCAGAGGAAGGACTACGAATCTGAAGGTTGCTCTTCTTCGCTGAATGATGATAAAGGCGATAAAGGCAAGAGAGTGGGATCTGTTTCAAATTCAAGCTCCTCTGCTGTGGTCCTCGAAGATGGATCGGAAGAAGAAGACAGTGACAGGGGTGGAAGCAGAACATTGGAGAAAAAAAGCAGTAAAATATTCGGCTTTTCAGTTACACACGGTGACAGTGACCACCCACCTGTCACCCGGCAGTTTTTTCCGGTGGAGGATTCCGACCTTCCTGATTCTGAAGCCGCCGCCGCCGGCGGAAGCTCTTCCTTCCCTCGTGCTCACTGGGTAGGCGTCAAATTTTGTCAATCGGAAGCTCTTGGCGCCGGCAAATCAGTGAAAGTCTCGGAGCCCATGAAGAAAAGTCGGCGAGGACCACGGTCGCGAAGCTCACAGTATCGCGGAGTTACCTTTTACAGGAGAACCGGTCGATGGGAGTCTCATATATGGGATTGTGGAAAGCAAGTGTATTTGGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCGTATGATAGAGCGGCCATTAAGTTCCGGGGGGTGGACGCAGATATCAACTTCAACATAGAAGACTATGAGGAAGACTTGAAGCAGATGAGCAATTTAACCAAGGAAGAGTTTGTGCACGTACTTCGCCGACAAAGCACTGGATTTCCGAGAGGAAGCTCCAAATATAGAGGTGTAACTTTGCACAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAATTTTTGGGCAAAAAGTACGTTTATCTGGGTCTTTTTGACACCGAGATTGAAGCTGCAAGGGCATATGACAAGGCGGCGATAAAATGCAACGGCAAAGAGGCCGTCACCAATTTTGATCCCAGCATCTATGATAATGAACTTAATTCTGAATCCTCAGGTGTAGCTGCAGATCACAATCTGGATTTGAGTTTGGGCAATTCGAGCTCTAAACATGGCAATGGTCAAATATCGGGGAATCACTTCCCAAATTCTGGGACCGATCAGCCCATACCACCTGAATCCAATTGGCGGAATGGAGGATCTAAGCCTAAGGCTCATCTGGTAAATATACTACCAAAACCATGTGGTAGAAGCAACATGGAAGGCTATGCAAGAGATGGGTTTGGGGAGAGTGAAACCTTGAGACTACTGAGCCAAACTCACCTTCAATCTCCAACGGCTAAAGAAATGCATAGATATGGTCCGTATAGGTCGCCTGCTGAGACTCAAATGCCTCATAATTTTGCACATCTTCACCTACCGAATTTTCATGTTCCTAGCAGCAGCAACGGAGGCCGTATTGGAAGCGATCTTTCGTTATCAATGTCTGATCAACAGCAATGGCAAGCCGGGCCTCCACATTTGTTAGCAACTGCTGCAGCATCATCAGGATTCCCACCTCAGATTAGACCCTCCCTAGGTTGGCAGCAGAAAAATGGGTTCCACTCCCTCATGAGACCTTCATGA | 1515 | 0.4805 | MWDLNDSPDQRKDYESEGCSSSLNDDKGDKGKRVGSVSNSSSSAVVLEDGSEEEDSDRGGSRTLEKKSSKIFGFSVTHGDSDHPPVTRQFFPVEDSDLPDSEAAAAGGSSSFPRAHWVGVKFCQSEALGAGKSVKVSEPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYDNELNSESSGVAADHNLDLSLGNSSSKHGNGQISGNHFPNSGTDQPIPPESNWRNGGSKPKAHLVNILPKPCGRSNMEGYARDGFGESETLRLLSQTHLQSPTAKEMHRYGPYRSPAETQMPHNFAHLHLPNFHVPSSSNGGRIGSDLSLSMSDQQQWQAGPPHLLATAAASSGFPPQIRPSLGWQQKNGFHSLMRPS* | 505 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu2g0171 | 504 | ProSiteProfiles | AP2/ERF domain profile. | 153 | 209 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu2g0171 | 504 | MobiDBLite | consensus disorder prediction | 322 | 358 | - | - | |
Pvu2g0171 | 504 | Gene3D | AP2/ERF domain | 152 | 211 | IPR036955 | GO:0003700|GO:0006355 | |
Pvu2g0171 | 504 | Gene3D | AP2/ERF domain | 244 | 303 | IPR036955 | GO:0003700|GO:0006355 | |
Pvu2g0171 | 504 | SMART | rav1_2 | 245 | 308 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu2g0171 | 504 | SMART | rav1_2 | 153 | 215 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu2g0171 | 504 | ProSiteProfiles | AP2/ERF domain profile. | 245 | 302 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu2g0171 | 504 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Pvu2g0171 | 504 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 502 | - | - | |
Pvu2g0171 | 504 | PANTHER | AP2 DOMAIN TRANSCRIPTION FACTOR | 1 | 502 | - | - | |
Pvu2g0171 | 504 | MobiDBLite | consensus disorder prediction | 1 | 109 | - | - | |
Pvu2g0171 | 504 | CDD | AP2 | 244 | 304 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu2g0171 | 504 | Pfam | AP2 domain | 153 | 201 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu2g0171 | 504 | Pfam | AP2 domain | 244 | 293 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu2g0171 | 504 | PRINTS | Ethylene responsive element binding protein signature | 246 | 257 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu2g0171 | 504 | PRINTS | Ethylene responsive element binding protein signature | 284 | 304 | IPR001471 | GO:0003700|GO:0006355 | |
Pvu2g0171 | 504 | MobiDBLite | consensus disorder prediction | 134 | 153 | - | - | |
Pvu2g0171 | 504 | SUPERFAMILY | DNA-binding domain | 152 | 210 | IPR016177 | GO:0003677 | |
Pvu2g0171 | 504 | SUPERFAMILY | DNA-binding domain | 244 | 304 | IPR016177 | GO:0003677 | |
Pvu2g0171 | 504 | MobiDBLite | consensus disorder prediction | 322 | 376 | - | - | |
Pvu2g0171 | 504 | CDD | AP2 | 153 | 210 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu2g0171 | Pvu-Chr2 | 1860815 | 1864323 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu2g0171 | 1 | 334 | AP2-EREBP Transcription Factor Family | AT4G36920 | 69.714 | 3.83e-137 | 401 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Pvu2g0171 | AP2 | 3.5e-10 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu2g0171 | K09284 | - | gmx:100786333 | 852.818 |