Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0169 ATGGAGGGTGAAGGAAGAAGAAGAGAAGAAGGGCAGAGAGAACCGACCAGGAAGCGAAGCGGCGTGGCGGTGGCGGTCGAGGGAGAGAGAAGATACAAAGGAATAAGGATGAGGAAGTGGGGCAAGTGGGTCGCGGAAATTAGGGAACCCAATAAGCGTTCAAGGATTTGGCTCGGTTCCTATTCCACCCCCGTCGCCGCCGCTCGTGCTTACGACACCGCCGTCTTCTACCTCCGGGGACCCTCCGCGCGCCTCAACTTCCCCGACCTTCTTGTCGGAGAGGGAACCACCCTTGTCGCCGGTTGCGACATGTCAGCTGCCTCTATCAGGAAGAAGGCCACCGAGGTCGGTGCCAGAGTTGACGCTCTACAGGCAACCCTGCACCACCACCACGTGGCGCCGGCGGCGCAGGAGCTTCTCTCGCGCGGCGACGGAGGTGGGTCCGGGGATTTCGCGGTTGACCTGAACAAGATGCCTGAACCCGAGAGTGAGGACTGCGAATGGGATGTGAATTGA 516 0.6047 MEGEGRRREEGQREPTRKRSGVAVAVEGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPDLLVGEGTTLVAGCDMSAASIRKKATEVGARVDALQATLHHHHVAPAAQELLSRGDGGGSGDFAVDLNKMPEPESEDCEWDVN* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0169 171 Pfam AP2 domain 31 80 IPR001471 GO:0003700|GO:0006355
Pvu2g0169 171 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
Pvu2g0169 171 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
Pvu2g0169 171 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Pvu2g0169 171 PRINTS Ethylene responsive element binding protein signature 70 90 IPR001471 GO:0003700|GO:0006355
Pvu2g0169 171 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 16 165 - -
Pvu2g0169 171 MobiDBLite consensus disorder prediction 150 171 - -
Pvu2g0169 171 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 16 165 - -
Pvu2g0169 171 SUPERFAMILY DNA-binding domain 31 89 IPR016177 GO:0003677
Pvu2g0169 171 MobiDBLite consensus disorder prediction 1 21 - -
Pvu2g0169 171 MobiDBLite consensus disorder prediction 1 17 - -
Pvu2g0169 171 CDD AP2 31 90 IPR001471 GO:0003700|GO:0006355
Pvu2g0169 171 Gene3D AP2/ERF domain 30 89 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0169 Pvu-Chr2 1837177 1838211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0169 19 165 AP2-EREBP Transcription Factor Family AT3G50260 61.905 7.58e-56 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu2g0169 AP2 1.2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0169 K09286 - gmx:100527066 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0169 2 1837177 1838211 Pvu2g0169 2 1837177 1838211 ECH
Pvu2g0169 2 1837177 1838211 Pvu3g2487 3 46504117 46504556 PCT