Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0163 ATGCCTGTGGAGCTCATGATGGGGTACAGGAACGACACTTTCGCCGAAGAGAATGCGGTTCGTGAAGCTGCGTCGGGGCTAGAGAGCGTCGAGAAGCTCATCAGGTTGCTGTCACGCGCCCAGCTGCAACAGCAGCAACAGCAGCAGCAGCAGCAACAATCGCACGCATCCAATTCGAAGTCTTCCATGGAAATTGAATCCGATTACGGAGCTGTCGCTGACGTGGCGGTTTCCAAGTTCAAGAAGGTCATTTCGCTTCTGGGCCGAACCAGAACCGGCCACGCGCGTTTCAGAAGAGCCCCCGTGCCTCCGCCGCCTCCTTCCGAGCCCAGATTCTACCGCGCAACGCCGCTGCAGCAGATCCCGCCGCCCACCGAACACCCTTTCATCCCTAAAAATGGACTGATTGACACAAAGGACTCCTCCAAGACCATCAATTTCTCCTATTCTAATTCCTTCGTCTCCTCCCTCACCGGCGACACCGACACGAAGCAGCCCTCTTCCTCGTCGCCTGCGGCGGCGGCTGCCACGGCAGCGCCTTTTCAGATCACGAATCTCTCTCAGGTCTCCTCCGCGGGAAAGCCTCCTCTTTCTTCGTCTTCGTTGAAGAGGAAGTGCAGCTCTGAGAATTTGGGTTCTGCCAATTGTGGGAGTTCCTCTAGCCGATGCCATTGCTCAAAGAAGAGTAGAAAAATGAGGTTGAAGAGGGTGGTGAGGGTACCAGCAATAAGTTTGAAGATGGCTGATATTCCACCAGATGATTATTCTTGGAGGAAATACGGACAGAAACCCATTAAAGGATCTCCTCATCCAAGGGGCTATTACAAGTGCAGCAGTGTTAGAGGGTGTCCAGCGCGCAAGCATGTAGAGAGGGCTTTGGATGACCCAGCTATGTTGGTAGTCACCTATGAAGGTGAACACAATCACTCACTCTCTGCAGTCGAAGCTACTACTAATCTTATCCTAGAATCTTCTTAG 978 0.5317 MPVELMMGYRNDTFAEENAVREAASGLESVEKLIRLLSRAQLQQQQQQQQQQQSHASNSKSSMEIESDYGAVADVAVSKFKKVISLLGRTRTGHARFRRAPVPPPPPSEPRFYRATPLQQIPPPTEHPFIPKNGLIDTKDSSKTINFSYSNSFVSSLTGDTDTKQPSSSSPAAAAATAAPFQITNLSQVSSAGKPPLSSSSLKRKCSSENLGSANCGSSSSRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLVVTYEGEHNHSLSAVEATTNLILESS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0163 325 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 13 325 - -
Pvu2g0163 325 SUPERFAMILY WRKY DNA-binding domain 248 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g0163 325 SMART WRKY_cls 251 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g0163 325 Gene3D WRKY domain 238 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu2g0163 325 MobiDBLite consensus disorder prediction 43 64 - -
Pvu2g0163 325 Pfam Plant zinc cluster domain 203 249 IPR018872 -
Pvu2g0163 325 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 325 IPR044810 GO:0003700
Pvu2g0163 325 Coils Coil 30 50 - -
Pvu2g0163 325 Pfam WRKY DNA -binding domain 253 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu2g0163 325 ProSiteProfiles WRKY domain profile. 246 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0163 Pvu-Chr2 1777772 1779281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0163 1 315 WRKY Transcription Factor Family AT2G24570 45.190 1.43e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu2g0163 WRKY 4.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0163 - - gmx:100804089 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0163 2 1777772 1779281 Pvu2g0163 2 1777772 1779281 ECH
Pvu2g0163 2 1777772 1779281 Pvu3g1446 3 33212871 33214510 PCT
Pvu3g2479 3 46413673 46415523 Pvu2g0163 2 1777772 1779281 PCT