Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0159 ATGGAACCAGCTTCAGCTCATTCTTCATCTCAACCTACTCCTCCAGTTTCTAATGCTGAAGAGCAACACTCAACCAAAGTGACTGGACAGATTAACAATGCACATGATTCACCATCATCGTTACCTGCTTCTGGCATGTCATCATGGGCAAGAAATCTGAAATTCCCAGGTCTTGGCCTTGGACCAGCACAACAGGATTCACAGACCGAAAACACAGGCATATCAGCTTTTGCTCGCCTGGCCAGTGGGCTTGGATTGCGAACGCAGTCAAAAGAAACTGCTCCTCCACTCAATTCAGGACCTGAGCAATCTAATTTGATTGAATCCTTCACCAAAGGGTTGATGGACTCTTCCAAGAGTGCAGTAAAAGCTGTCCAGGTCAAAGCACGCCATATTGTCTCACAAAATAAACGTAGATACCAGGAAGATGGATTTGATTTGGATATGACATACATTACTGAAAATATAATTGCTATGGGATTTCCGGCTGGTGATTTTAGCTCTGGAATTTTTGGATACATTGAGGGGTTCTATCGCAATCACATGGAAGAAGTGATCAACTTTTTTGAAACACATCATAAGGGTAAATACAAAGTATACAATCTTTGTTCAGAAAGGTTATATGATGGATCATTATTCCAGGGGAAGGTTGCAACTTTCCCATTTAGTGATCATAATTGCCCTCCTATTCAACTTATAGCATCATTCTGTCAAAGTGCATATTCATGGTTGAAGGAGGATATTCAAAATGTGGTGGTTGTTCATTGTAAAGCTGGTATGGGGAGGACTGGACTGATGATATGTTGTCTTCTTTTGTTTCTAAAGTTCTTCCCAACTGCAGAAGAAGCCATTGATTACTTTAACCATAAAAGATGTGTAGATGGAAAGGCTCTAGTCCTCCCTAGTCAAATAAGATATGTAAAATACTTTGAACGGACTTTAACACAATTCAATGGAGAAGTCCAGCCTGGACGAAGGTGCATACTTAGAGGGTTCCGGCTTCACAAGTGCCCTTATTGGGTTAGACCATCTATTACAATTTCTGATCATAAGGGAGTTCTGTTTGCCACAAAAAACCATCCCAAAACAAAAGATCTATTGCCAGAAGATTTCTGGATCAGTGCACCGAAGAAAGGAATTGTGGTTTTTGCACTACCAGGAGAACCTGGTCTGACGGAGTTGGTAGGAGACTTCAAAATTCATTTTAATGATAGACATGGAGATTTCTACTGTTGGATGAATACAACAATGACAGAAAATCGAAAAATTTTAGATGGTTCAGATTTTGATGGGTTCGACAAGAGGAAGATCCCCGCTCCAGGATTCCGGGTGGAAGTTGTCATGATAGACTATAATGGCACCCTACCTGCAAGAACAAAAGCCAATCCCGCCAGCAAAGGATCTGACGGAAACACAACCAGTGCCCTACCTGGTCCAAAACCTACTACTTCTAATTCAACTGAGAGTAAACTCCCAAGAACTGGAGATGATGATGTATTCTCAGACAGTGATGAAGAGGAGAGCCGAGATACACAAAGCAAGAAAGCTGCAACTGAGTACAAATTTATGGCACCTCATCAAGTATCTGAGGGGACAACAGACCATGTAGGGATGTTGACACACACAACGGATCGGTTGTCACTACAGCATGAGGCACGCAGGCAAGACAATTATTCTGAAGAATCAACTGCAGATAAACATCACAAAATTCATACAGGCAATAGCAGCACAAACGTGGGATCTGTAGGGGCAAGTGACATCAAGGCAATTGCAGCAGATGCTTCAGTTTTTTCCTTTGGGGATGAAGACTTTGAGAGTGATTGA 1824 0.4189 MEPASAHSSSQPTPPVSNAEEQHSTKVTGQINNAHDSPSSLPASGMSSWARNLKFPGLGLGPAQQDSQTENTGISAFARLASGLGLRTQSKETAPPLNSGPEQSNLIESFTKGLMDSSKSAVKAVQVKARHIVSQNKRRYQEDGFDLDMTYITENIIAMGFPAGDFSSGIFGYIEGFYRNHMEEVINFFETHHKGKYKVYNLCSERLYDGSLFQGKVATFPFSDHNCPPIQLIASFCQSAYSWLKEDIQNVVVVHCKAGMGRTGLMICCLLLFLKFFPTAEEAIDYFNHKRCVDGKALVLPSQIRYVKYFERTLTQFNGEVQPGRRCILRGFRLHKCPYWVRPSITISDHKGVLFATKNHPKTKDLLPEDFWISAPKKGIVVFALPGEPGLTELVGDFKIHFNDRHGDFYCWMNTTMTENRKILDGSDFDGFDKRKIPAPGFRVEVVMIDYNGTLPARTKANPASKGSDGNTTSALPGPKPTTSNSTESKLPRTGDDDVFSDSDEEESRDTQSKKAATEYKFMAPHQVSEGTTDHVGMLTHTTDRLSLQHEARRQDNYSEESTADKHHKIHTGNSSTNVGSVGASDIKAIAADASVFSFGDEDFESD* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0159 607 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 252 291 IPR000387 GO:0016311|GO:0016791
Pvu2g0159 607 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 11 607 - -
Pvu2g0159 607 MobiDBLite consensus disorder prediction 551 572 - -
Pvu2g0159 607 MobiDBLite consensus disorder prediction 1 47 - -
Pvu2g0159 607 ProSiteProfiles C2 tensin-type domain profile. 324 451 IPR014020 -
Pvu2g0159 607 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 143 314 IPR029021 -
Pvu2g0159 607 SMART PTEN_C2_2 322 450 IPR014020 -
Pvu2g0159 607 MobiDBLite consensus disorder prediction 1 48 - -
Pvu2g0159 607 CDD PTP_PTEN 148 312 IPR045101 GO:0016791
Pvu2g0159 607 ProSiteProfiles Phosphatase tensin-type domain profile. 138 317 IPR029023 -
Pvu2g0159 607 Gene3D Protein tyrosine phosphatase superfamily 123 320 IPR029021 -
Pvu2g0159 607 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 11 607 - -
Pvu2g0159 607 MobiDBLite consensus disorder prediction 458 490 - -
Pvu2g0159 607 MobiDBLite consensus disorder prediction 456 529 - -
Pvu2g0159 607 MobiDBLite consensus disorder prediction 551 580 - -
Pvu2g0159 607 ProSitePatterns Tyrosine specific protein phosphatases active site. 254 264 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0159 Pvu-Chr2 1734683 1744328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0159 36 607 Protein tyrosine phosphatase (PTP) family AT3G19420 61.252 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0159 K01110 - gmx:100801622 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0159 2 1734683 1744328 Pvu2g0159 2 1734683 1744328 ECH
Pvu2g0159 2 1734683 1744328 Pvu7g0391 7 3059897 3067899 PCT