Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0139 ATGTTGGACCGATGCCTGAGGCCACTGGAGATGTGCTTCGGTGGTGGAGGAGACGACGAAACCCTCCTCTGGGACACTGACCTTAAACCTCACGCTTCAGGGAACTACTCGATTGCAGTGGTACAAGCCAATTCTTCCTTGGAAGACCAAGCACAAGTCTTCACCTCTCCGTCTGCAACCTTTGTTGGCGTCTACGACGGCCACGGTGGACCCCAAGCTTCCCGATTCATCACCAATCATCTCTTCTCCTTCGTCCGCAAGTACACAGCAGAGGAAGGTGGATTGTCAGAGGAAGGGATAAAGAAAGCGTTCGAGTCAACAGAGGAGGAGTTTTTGCGTTTTGTGAAACAATCATGGATTGCGCGACCACAAATGGCTTCAGTGGGTTCGTGCTGTCTTCTGGGAGCGATTTCAAAGAACGTTCTTTATGTTGCTAATCTGGGGGATTCAAGGGCGGTTTTGGGCCGGGAAGCGTTGGAAGGAGAGGTGAATTGCGGTGGTGTGGTGGCAGAGCGTTTGTCCACTGATCACAATGTTGGAGTGGAGGAGGTCAGAAAGGAGGTGGAGGCTCTTCACCCTGATGACGCACACATTGTGGTTTGCATTCGTGGAGTTTGGCGAATCAAGGGCATTATTCAGGTATCAAGATCAATCGGAGATGCTTACTTAAAGAAACCAAATTTTGACACAAATCCTCTGTTCCAACAAATTGTATATCCAGTATACTTGAAGAGACCTGTAATGACAGCAGAACCATCAATAGTGACGCGGAAATTGAAGGCAAATGATTTATTTTTGATCTTTGCATCAGACGGACTCTGGGAGAATTTAACTGATGAAGAGGTTGTTCAAATTATATCCAAAAGTCCCAGAATAGGAATAGCAAAACGACTGGTGACAGTTGCACTAGAAGAGGTTGCAAAGAAAAGAGAAATGAAGTATGATGACTTGAAGAAAGTTGAGAAAGGTTTGAGGCGTCATTTTCATGATGATATTACCGTGATCGTTCTGTATCTCGATCATTCAAAAAAATCTATAAATGGTAGCTCAAGACATAAAGGAGATTATGACTGCATTAATACTCCTATTGATATCTTCTCTCAAACTGCAGATTACGTTCATCTTTAA 1128 0.4477 MLDRCLRPLEMCFGGGGDDETLLWDTDLKPHASGNYSIAVVQANSSLEDQAQVFTSPSATFVGVYDGHGGPQASRFITNHLFSFVRKYTAEEGGLSEEGIKKAFESTEEEFLRFVKQSWIARPQMASVGSCCLLGAISKNVLYVANLGDSRAVLGREALEGEVNCGGVVAERLSTDHNVGVEEVRKEVEALHPDDAHIVVCIRGVWRIKGIIQVSRSIGDAYLKKPNFDTNPLFQQIVYPVYLKRPVMTAEPSIVTRKLKANDLFLIFASDGLWENLTDEEVVQIISKSPRIGIAKRLVTVALEEVAKKREMKYDDLKKVEKGLRRHFHDDITVIVLYLDHSKKSINGSSRHKGDYDCINTPIDIFSQTADYVHL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0139 375 Pfam Protein phosphatase 2C 57 300 IPR001932 -
Pvu2g0139 375 ProSiteProfiles PPM-type phosphatase domain profile. 35 339 IPR001932 -
Pvu2g0139 375 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 3 372 - -
Pvu2g0139 375 PANTHER ALPHABET, ISOFORM E-RELATED 3 372 - -
Pvu2g0139 375 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Pvu2g0139 375 SUPERFAMILY PP2C-like 40 341 IPR036457 -
Pvu2g0139 375 CDD PP2Cc 42 339 IPR001932 -
Pvu2g0139 375 SMART PP2C_4 28 337 IPR001932 -
Pvu2g0139 375 Gene3D - 25 348 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0139 Pvu-Chr2 1528770 1534129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0139 1 345 PP2C-type Phosphatase Gene Family AT3G51370 50.281 5.81e-130 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0139 - K01102 gmx:100802394 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0139 2 1528770 1534129 Pvu2g0139 2 1528770 1534129 ECH
Pvu2g0139 2 1528770 1534129 Pvu7g0437 7 3425463 3428670 PCT