Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0122 ATGGGTGAAGAGCTAAAAACTATGGTGGTTGTGAGAGTGTTCGATCCCAATAGAGATAGAGAAAGAGTAGAAGCCGTTGAAAGGATATGTGAAGTTGGACCCAGTGGCAAACTTTCTCTCTTCACCGACATGCTGGGTGATCCTATTTGCAGGGTCCGCCATTCGCCTGCTTTTCTCATGCTGGTAGCAGAGATTGGCGAAGAGGTAGTGGGAATGATAAGAGGATGCATAAAAACGGTGACATGCGGAAAAAGAGTGTCCAGGAACGGAAAGCACAATGCCAATAATGCTAAACATGTTCCAGTGTATACTAAAGTGGCTTACATACTAGGCCTTCGCGTTTCGCCTAATCAACGGAGAATGGGAATAGGGTTGAAGCTGGTGCATAGGATAGAGGAGTGGTTCAGGGATAATGGAGCCGAGTATTCCTACATGGCAACGGAAAACGACAATTTAGCGTCCGTTAAACTCTTCACCGACAAATGCGGGTATTCAAAGTTCCGTACCCCGTCCATGCTTGTCAACCCCGTTTTCGCCCACCGAGCAAGAGTGTCCCCAAAGGTCACAATCATTAGCCTTTCCCCTTCTGACGCAGAGGCTATCTACCGTCGCCGTTTTGCCACGACGGAGTTCTTCCCGCGCGACATTGACTCCGTTCTGAAGAACAAGCTCAGTCTGGGGACGTTTCTGGCGGTCCCGGGCGGGTCCTACAGGGCTGAGACATGGCCCGGGCCAGATCTTTTCCTGTCGGACCCACCGAAGTCGTGGGCCTTGGTGAGCGTGTGGAACTCGAAGGAGGTGTTCACGCTCGAGGTTAGAGGCGCGTCGCGCGTGAAGCGCACTCTCGCGAAGACGACGCGGGTCGTGGACCGGGCCCTGCCGTGGCTGCGTGTACCGTCGATCCCGGATTTGTTCAGGCCGTTTGGGTTTCACTTCATGTACGGGCTTGGAGGGGAAGGCCCAGATGCAGTGAAGATGGTGAAGGCCCTGTGTGGGTTCGCGCACAACCTCGCGATGGAAAAAGGTTGCAGGGTGGTGGCCACGGAAGTGTCACCAAACGAGCCCTTAAGGTTCGGTATACCCCACTGGAAGATGCTGTCGTGTGACGAAGATTTATGGTGTATGAAGCGGTTGGGTGAGGATTACAGCGACGGTTCCGTTGGTGACTGGACCAAATCTCAACCCGGAATGTCCATTTTTGTTGACCCGAGAGAGGTCTAA 1221 0.5315 MGEELKTMVVVRVFDPNRDRERVEAVERICEVGPSGKLSLFTDMLGDPICRVRHSPAFLMLVAEIGEEVVGMIRGCIKTVTCGKRVSRNGKHNANNAKHVPVYTKVAYILGLRVSPNQRRMGIGLKLVHRIEEWFRDNGAEYSYMATENDNLASVKLFTDKCGYSKFRTPSMLVNPVFAHRARVSPKVTIISLSPSDAEAIYRRRFATTEFFPRDIDSVLKNKLSLGTFLAVPGGSYRAETWPGPDLFLSDPPKSWALVSVWNSKEVFTLEVRGASRVKRTLAKTTRVVDRALPWLRVPSIPDLFRPFGFHFMYGLGGEGPDAVKMVKALCGFAHNLAMEKGCRVVATEVSPNEPLRFGIPHWKMLSCDEDLWCMKRLGEDYSDGSVGDWTKSQPGMSIFVDPREV* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0122 406 Gene3D - 40 170 - -
Pvu2g0122 406 Pfam Acetyltransferase (GNAT) family 54 164 IPR000182 GO:0016407
Pvu2g0122 406 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 183 IPR000182 GO:0016407
Pvu2g0122 406 CDD NAT_SF 60 142 - -
Pvu2g0122 406 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 6 405 - -
Pvu2g0122 406 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 49 166 IPR016181 -
Pvu2g0122 406 PANTHER N-ACETYLTRANSFERASE 6 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0122 Pvu-Chr2 1361340 1363160 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pvu2g0122 Acetyltransf_1 9.2e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0122 - - gmx:100800613 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0122 2 1361340 1363160 Pvu2g0122 2 1361340 1363160 ECH
Pvu2g0122 2 1361340 1363160 Pvu3g2426 3 45806095 45808656 PCT