Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0120 ATGAAAGCTCTTCACTTGAGCTTCTTCCACAACCTCCTCCTCACACTGTTCCTCTCCCTCTCCATCGCAGTCAACACTGCAAAAGGGGGTGTCAAGAGTAGTACCAGCGCCGATGAATTTGGCACAAGAAGAATTCTGCACCAGCCATTGTTCCCGGAGAGTTCGGCACCACCGCCACCGCTTCCGGTGGAGACCCCTCCTTCTCCGGAAGGCGGCAACATCCCCTTCTTCCACGAGAACCCGGCGGGGGCCCCGCCGGATCAGAGCCAAGCAGCACCTTCCACTTCCAACAGTTCAATTGCAAACCCAACTGCAACACAACCCACAAAGGGAACAAAGAAAGTTGCAATCGCGATCTCGGTGGGCATTGTGACGCTTGGAATGCTCTCAGCGTTGGCCTTCTTTTTGTACAAACACAGAGCCAAACACCCCGTCGAGACTCAAAAACTCGTGCCCGGGAGAGGGAATAACAATAGCAATAACAATATCCCGAACAGAAACGAGGTTGATTCGACTGCGCCACCGTCGAGTTTCCTCTACATTGGGACAGTGGAACCCACGCGAGCCTCTACCAACGACTCGCGAGATAACAGGGATGTTAACAAGGCCAATAGATCGCCGTATCACAAGCTCAAGCGATCCGATCGCTACCGTCCGAGTCCTGAGTTGCAGCCAATGCCACCGCTCAGTAAGCCTCCCGACGGAAACTACCCGCCGGCGGTCTCCTCTTCGTCGGACTCCGATGAGGAGAGCCGGGGCACGGTGTTTCACTCGCCGCAGAACTCGTCGGTCGATGGATACTACACGCCGGCGTCGCGGCAGAGCTCTCTCGTTAACGGTAGTCCCGCGAAGCGTGACGCGAATTCCACGCCCACACCCGTCGTTCCGTTTTCCAAGAGAACTTCGCCCAAGTCACGCGTTTCGGCACCCTCGCCGGAGATACGCCACGTTATCATTCCGTCTATAAAGCAGCCGCCACCACCGTCGCCGCCGCCACCTAAGCATTCCAGAAAGCCGAAATTTTCGGCGCCTCCCCCACCTCCGAATTTGAAGCATCTTCAGTCTACAACCGACACTGTTTCGCATGTGTCAAAGACTTCACTCAATCCTCCTCCTCCGCCACCTCCGCCACCTCCACCACCTCCACCACCTCCACCGCAGCCGCGAAAATCAGTGTCTCCAGCGGTTAGTGCTTCCTCTAATTCTGCATCTGTAAAGAGGCAGTCTTGGTCACCAGTTGAATGTAGTGTGATGAAAAGTTCAGAAGAGGTTGAACAGAGTGTGAGCTCTTCCGAGAGGCTTGAAACCAATGACAAGGATGGAGCCAAACCAAAATTAAAGGCTCTGCATTGGGATAAAGTGCGTGCGACCTCAGACCGTGCTACAGTGTGGGACCAGATAAAATCAAGCTCGTTTCAGTTAAATGAGGACATGATGGAATCGTTGTTTGGATGCAAAGCCACGAATTCTGCCCCGAAAGAACCTTCCAGAAAATCAGTTCTTCCTTCGGTTGATAAGGAGAACAGAGTGTTAGACCCGAAGAAGTCACAGAACATAGCTATACTGCTCAGGGCTTTGAATGTGACCAGAGATGAGGTGTCTGAAGCTCTTTTGGATGGGAATCCTGAAGGCTTGGGCACTGAGCTATTAGAAACACTAGTAAAGATGGCTCCGACTAAAGAAGAGGAGATAAAGCTTAAAACCTATGATGGTGATCTCTCAAAGCTGGGTTCTGCAGAAAGGTTTCTTAAAGCAGTGCTTGATATCCCTTTTGCCTTTAAAAGAGTTGAAGCTATGCTATATAGAGCCAACTTTGATGCAGAAATTAACTACCTTAGAAAGTCTTTTCAAACCATGGAGGCTGCAAGTGATGAATTAAAGAACAGCCGCTTATTCCTCAAACTCATTGAAGCTGTTCTAAGGACGGGAAACAGAATGAACGTTGGCACTAATCGAGGGGATGCTAAAGCTTTCAAACTGGAGACACTCTTAAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTCCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTGCAGGAGCTGAACCTGCAAATGAGAATGTGAAAATGGATTCGAAATTTAATGAGGATGAGTTTAAGAAGCAAGGATTGCAGGTTGTGGCAGGGCTTAGTAGAGATCTTAGTAATGTAAAAAAAGCAGCAGGAATGGATTCAGATGTCTTGAGCAGCTATCTTTCAAAGCTTGAAACAGGTCTTGATAAAGTGCGTTTGGTTTTGCAATATGAAAAGCCAGATGTGCATGGGAATTTCTTTAACTCCACAAAGCTATTTCTGAAATATGCTGAAGATGAAATTGTAAGGATTAAAGCGGATGAGAGAAAAGCTTTGTACCTTGTAAAAGAAGTTACGGAATACTTTCATGGGAATGCAGCAAAGGAAGAAGCTCATCCTCTCAGAATTTTCATGATTGTAAGAGACTTTCTGAGTATTTTGGATCTTGTGTGCAAAGAAGTGGAAAAGATGCATGATAAAATTGTAGGTGGTTCTGGCAGATCTTTCCGAATACCTCCAAATGCATCATTACCTGTTCTCAATAGGTACAACCATCCAAAGCAGGATAGAAGCTCAGACGAGGAAAGTTCTTCCCCCTAG 2652 0.4815 MKALHLSFFHNLLLTLFLSLSIAVNTAKGGVKSSTSADEFGTRRILHQPLFPESSAPPPPLPVETPPSPEGGNIPFFHENPAGAPPDQSQAAPSTSNSSIANPTATQPTKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKHPVETQKLVPGRGNNNSNNNIPNRNEVDSTAPPSSFLYIGTVEPTRASTNDSRDNRDVNKANRSPYHKLKRSDRYRPSPELQPMPPLSKPPDGNYPPAVSSSSDSDEESRGTVFHSPQNSSVDGYYTPASRQSSLVNGSPAKRDANSTPTPVVPFSKRTSPKSRVSAPSPEIRHVIIPSIKQPPPPSPPPPKHSRKPKFSAPPPPPNLKHLQSTTDTVSHVSKTSLNPPPPPPPPPPPPPPPPPQPRKSVSPAVSASSNSASVKRQSWSPVECSVMKSSEEVEQSVSSSERLETNDKDGAKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCKATNSAPKEPSRKSVLPSVDKENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGTELLETLVKMAPTKEEEIKLKTYDGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDAEINYLRKSFQTMEAASDELKNSRLFLKLIEAVLRTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAGAEPANENVKMDSKFNEDEFKKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYLSKLETGLDKVRLVLQYEKPDVHGNFFNSTKLFLKYAEDEIVRIKADERKALYLVKEVTEYFHGNAAKEEAHPLRIFMIVRDFLSILDLVCKEVEKMHDKIVGGSGRSFRIPPNASLPVLNRYNHPKQDRSSDEESSSP* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0120 883 Pfam Formin Homology 2 Domain 439 831 IPR015425 -
Pvu2g0120 883 PANTHER FORMIN-LIKE PROTEIN 2 883 - -
Pvu2g0120 883 MobiDBLite consensus disorder prediction 367 391 - -
Pvu2g0120 883 MobiDBLite consensus disorder prediction 87 112 - -
Pvu2g0120 883 MobiDBLite consensus disorder prediction 861 883 - -
Pvu2g0120 883 MobiDBLite consensus disorder prediction 147 441 - -
Pvu2g0120 883 MobiDBLite consensus disorder prediction 321 351 - -
Pvu2g0120 883 SMART it6_source 436 846 IPR015425 -
Pvu2g0120 883 ProSiteProfiles Formin homology-2 (FH2) domain profile. 436 857 IPR015425 -
Pvu2g0120 883 MobiDBLite consensus disorder prediction 50 112 - -
Pvu2g0120 883 MobiDBLite consensus disorder prediction 426 441 - -
Pvu2g0120 883 MobiDBLite consensus disorder prediction 352 366 - -
Pvu2g0120 883 MobiDBLite consensus disorder prediction 52 69 - -
Pvu2g0120 883 PANTHER FORMIN-RELATED 2 883 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pvu2g0120 883 MobiDBLite consensus disorder prediction 151 190 - -
Pvu2g0120 883 MobiDBLite consensus disorder prediction 392 425 - -
Pvu2g0120 883 MobiDBLite consensus disorder prediction 191 219 - -
Pvu2g0120 883 MobiDBLite consensus disorder prediction 237 308 - -
Pvu2g0120 883 SUPERFAMILY Formin homology 2 domain (FH2 domain) 375 842 - -
Pvu2g0120 883 MobiDBLite consensus disorder prediction 221 235 - -
Pvu2g0120 883 Gene3D Formin, FH2 domain 430 843 IPR042201 -
Pvu2g0120 883 PRINTS Proline rich extensin signature 213 225 - -
Pvu2g0120 883 PRINTS Proline rich extensin signature 227 243 - -
Pvu2g0120 883 PRINTS Proline rich extensin signature 291 312 - -
Pvu2g0120 883 PRINTS Proline rich extensin signature 326 342 - -
Pvu2g0120 883 PRINTS Proline rich extensin signature 370 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0120 Pvu-Chr2 1301815 1307724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0120 43 873 FH2 protein (formin) Gene Family AT5G67470 57.818 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0120 - - gmx:100798670 1310.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0120 2 1301815 1307724 Pvu2g0120 2 1301815 1307724 ECH
Pvu2g0120 2 1301815 1307724 Pvu3g2424 3 45765514 45770511 PCT