Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0118 ATGGGGAGTTCTGGCACTTTTTCCTTGTCTAGCCTCATGTGTGAAGAAGGCGAAGCTTGCTTCTTTGAACACCTAGATGAGAACCCTGACCCTATTGACTCCCTTGATACCCCATGTTTCGTTTTGGAGGATGAAGAGGAATACATTGAGTATTTGCTCAGACAAGAAACGGGATTTGGATCCCAAAATCAACCATTTTTGGCCTCCGATGATCGATCCAACAGAAACTGGTTGAGGAGTGCCCGTGTGGATGCCATTGACTGGATTTTCAATTCACAAGCAAAATTTGGGTTCAGAGTTGAGACGGCCTATGTATCAGTGACTTACTTTGATCGGTTCCTTTCAAAGCGATCAATTGATGAATCAAAACCTTGGGCTATTCACTTGTTATCTGTGGCATGTTTGTCGCTGGCAGCAAAGATAGAAGAGCAGAATGTGCCGGTTCTATCTGATTATCCAATGGAAGAATATCGCTTTGAGAACAAAGTAATTAAGAACATGGAACTGATGATTTTGAGTACCTTGGAATGGAAAATGGGATCAGCAACTCCTTTTGCCTATTTGCATTACTTTGTCGGCAAGTTCTGCCCTGGATCCAGACCACAAACAATAATCACAAAAGCCATTCAACATATTGTGGCCATGGTCAAAGATGTTAATCTGATGGATCAACGACCATCTATAATTGCCTCGGCTGCCATATTGGCAGCTTCTGATGCTACATTAACAAGAAAAGGAATGGATCTTCGAATAAGTGTAATCTCATCGTGTGGAAGTCTAGAAAGTGGAGATGTGTTTTTCTGTTACAATCTAATACAGGAAAAGAGGAAAAACGAAGTTAAGACTCCTTGCTCGAATTTAATGTCTACCCAGTCGAGCTCCACGTGTGTTCTTGAGAACCCATCTGACACTTGTTCAGGAGCTAAGAGAAAACTTAGTTTTGAGGACAGTGAAAATTGTGCAGCACAGAAGCTACATCGGTCTTAG 987 0.4195 MGSSGTFSLSSLMCEEGEACFFEHLDENPDPIDSLDTPCFVLEDEEEYIEYLLRQETGFGSQNQPFLASDDRSNRNWLRSARVDAIDWIFNSQAKFGFRVETAYVSVTYFDRFLSKRSIDESKPWAIHLLSVACLSLAAKIEEQNVPVLSDYPMEEYRFENKVIKNMELMILSTLEWKMGSATPFAYLHYFVGKFCPGSRPQTIITKAIQHIVAMVKDVNLMDQRPSIIASAAILAASDATLTRKGMDLRISVISSCGSLESGDVFFCYNLIQEKRKNEVKTPCSNLMSTQSSSTCVLENPSDTCSGAKRKLSFEDSENCAAQKLHRS* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0118 328 Pfam Cyclin, N-terminal domain 49 179 IPR006671 -
Pvu2g0118 328 SUPERFAMILY Cyclin-like 36 179 IPR036915 -
Pvu2g0118 328 Gene3D - 72 179 - -
Pvu2g0118 328 PANTHER CYCLINS 48 311 IPR039361 -
Pvu2g0118 328 SMART cyclin_7 87 173 IPR013763 -
Pvu2g0118 328 CDD CYCLIN 82 172 IPR013763 -
Pvu2g0118 328 ProSitePatterns Cyclins signature. 82 113 IPR006671 -
Pvu2g0118 328 PANTHER CYCLIN-D5-1 48 311 - -
Pvu2g0118 328 Pfam Cyclin, C-terminal domain 183 294 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0118 Pvu-Chr2 1285998 1288699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0118 8 262 Core Cell Cycle Gene Families AT4G37630 34.082 6.40e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0118 K18811 - gmx:100798140 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0118 2 1285998 1288699 Pvu2g0118 2 1285998 1288699 ECH