Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0113 ATGAGGTTTCCTCTAGCCGGCGCAAGAGCTGCAAGGCGCATTTCACGGCGCGCCGCTCTCCGGTCGAAATACAACGTGCGTTCCATTCCGGTTCGGAAGGACGACGAGGTGAACGGGCTCCACCGTCAACGTCGGCATTCACCTTCAAAGGTTGTCGTCACGAAGTTGCGAATGGACAAGGACCGTAAATCCTTGCTCGATCGCAAGGCTAAGGGCCACGCCGCCGCCGCCGCTGACAAGGAAAAGGGTACAAAATTTGCCCGAGGATATCATGCAGACGGTTGA 285 0.5719 MRFPLAGARAARRISRRAALRSKYNVRSIPVRKDDEVNGLHRQRRHSPSKVVVTKLRMDKDRKSLLDRKAKGHAAAAADKEKGTKFARGYHADG* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0113 94 PANTHER 60S RIBOSOMAL PROTEIN L26-1 18 38 - -
Pvu2g0113 94 PANTHER 60S RIBOSOMAL PROTEIN L26-1 47 87 - -
Pvu2g0113 94 Gene3D - 38 88 IPR014722 -
Pvu2g0113 94 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 20 69 IPR005756 GO:0003735|GO:0006412|GO:0015934
Pvu2g0113 94 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 18 38 IPR005756 GO:0003735|GO:0006412|GO:0015934
Pvu2g0113 94 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 47 87 IPR005756 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0113 Pvu-Chr2 1255006 1255386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0113 20 87 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 49.020 1.02e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0113 K02898 - gmx:100819391 77.0257