Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0109 ATGGATACAACGTTGTTTGGAGTAGTGAGATTCCAACATCAACTACAAGCTCAAGCTCAAGCTCAAGCTGATCAAGATCAATCCCTCAACAACTCCACCACCACCAGCAGCTCTCGATCTTCCAGACAACAAAACTATCCCTGTCCACAAGAAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACCTATCCTCGTCTTCTTCCAAGCACTACTATCCCTATCAACCCCACCCTCCCTCCACTACACCAACCACCACCACCGACCTCTCCTTCTCTCCCACCCGCGACGCAGCCTTCCCTTTCCAGCTCTCCGGCAAGTGGGCCCACGACATCCTCCTCGAAACCGCACGTGCCGTCTCCGACAAGAACACCACGCGCCTCCAGCAACTGATGTGGATGCTCAACGAACTGGCCTCCCCCTACGGCGACACCGACCAGAAACTGGCCTCCTACTTCCTCCAAGCCTTCTTCAGCCGCATCACTCAAGCCGGGGACCGAACCTATCGAACCTTGGCCTCGGCCTCCGAGAAAACATGCTCCTTCGAATCCACGCGCAAGACGGTGCTGAAGTTCCAAGAGGTCAGTCCCTGGACAACCTTCGGACACGTGGCGTCGAATGGTGCCATCTTGGAAGCCTTGGAAGGCGAGCCCAAACTACACATAGTTGACATCAGCAACACCTATTGCACCCAATGGCCTACGCTCTTCGAAGCCTTGGCCACTCGAAACGACGACACTCCGCACCTCCGTCTAACCTCCCTCGTCACCGCCGCCTCCGCGCACAAGGTCATGAAGGAAATCGGCGCCAGAATGGAGAAATTCGCCAGACTCATGGGCGTGCCCTTTCAATTCAACGTCGTTCATCACTTAGGCCAACTTTCCGACTTCGATTTCAGCGCCTTGGATATCAAAGAGGACGAGGCTTTGGCCATTAACTGTGTCAATACTTTGCATTCGATCTCCGCCCTCGGGAGCCACCGTGAAGCGGTCATATCCTCGTTGAGGAGGCTGCAGCCGAGGATCGTGACGCTGGTGGAGGAAGAGGCGGACTTGGACGTGGGATTGGAGGGGTTGGAGTTCGTGAAGGGGATTGAAGAGTGCTTGAGGTGGTTTAGGGTTTACTTCGAAGCGTTAGAAGAGAGCTTTCCGCGGACGAGCAACGAGCGGTTGATGCTGGAGCGGGCGGCGGGGAGGGAGGTGGTGGACCTGGTGGCATGTTCGGCGGCGGATTCGGTGGAGCGGCGGGAGAGGGCGGGGCGGTGGACGAGGAGGATGCATGGTGGTGGATTCAATACGGTGGCGTTTAGCGAAGAGGTTTGTGATGATGTGCGAGCGTTGTTGAGGAGGTATAGGGAGGGATGGGCAATGGCACAGTGCTCCGACGCCGGAATATTCCTTTCGTGGAAGGACCAGCCGGTGGTGTGGGCCAGTGCATGGAGGTCCTTGACGTAG 1458 0.5631 MDTTLFGVVRFQHQLQAQAQAQADQDQSLNNSTTTSSSRSSRQQNYPCPQEDEECFNFFMDEEDLSSSSSKHYYPYQPHPPSTTPTTTTDLSFSPTRDAAFPFQLSGKWAHDILLETARAVSDKNTTRLQQLMWMLNELASPYGDTDQKLASYFLQAFFSRITQAGDRTYRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGEPKLHIVDISNTYCTQWPTLFEALATRNDDTPHLRLTSLVTAASAHKVMKEIGARMEKFARLMGVPFQFNVVHHLGQLSDFDFSALDIKEDEALAINCVNTLHSISALGSHREAVISSLRRLQPRIVTLVEEEADLDVGLEGLEFVKGIEECLRWFRVYFEALEESFPRTSNERLMLERAAGREVVDLVACSAADSVERRERAGRWTRRMHGGGFNTVAFSEEVCDDVRALLRRYREGWAMAQCSDAGIFLSWKDQPVVWASAWRSLT* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0109 485 MobiDBLite consensus disorder prediction 69 93 - -
Pvu2g0109 485 Pfam GRAS domain family 112 482 IPR005202 -
Pvu2g0109 485 PANTHER PROTEIN SHORT-ROOT 6 482 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Pvu2g0109 485 MobiDBLite consensus disorder prediction 19 49 - -
Pvu2g0109 485 ProSiteProfiles GRAS family profile. 101 482 IPR005202 -
Pvu2g0109 485 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 482 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0109 Pvu-Chr2 1218350 1220447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0109 45 482 GRAS Transcription Factor Family AT4G37650 62.500 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu2g0109 GRAS 3.5e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0109 - - gmx:100820459 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0109 2 1218350 1220447 Pvu2g0109 2 1218350 1220447 ECH
Pvu2g0109 2 1218350 1220447 Pvu3g2418 3 45719832 45721804 PCT