Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0104 ATGGCCACCACCACTTCCAAGCCAACCTTATCCGTGCCTTTCCTCTCCCATGCCTCCACTCCTAACTGCCACTTCTTCCATCTTCTATCACCACTCGCAACTGCAACCCTCCCTCGCCGTTCTTGTACTTTCCGGCCACACAACACCAAAACGACTGCGTTTTCGCGGAGAGGCTGCGGCTGTCACCGGAGTCGAGCCGACGAAGACTTCGGCAGTTCGGAAGAAGACGAAGAGTTCGTCAAGGTTCTCAGGGAATCTCAGCCCTACTTTTCGGTGCACAGCGCCAGGGTTTTCGTTTTGCTCGTATCTGCAGAAGTTGTTGCCAGCCCTTGCTTGGATCCTATTCTCAAGGATATAGCTTTCCTTCATCACCTAGGAATCCGGTTTGTTCTTGTTCCGGGGACACATGTGCAGATAGACAAGCTTCTGAATGAGAGAGGGTGCCAGCCTAAGTATGTTGGTAGATATAGGATAACTGATGAAGAATCTCTAGAAGCTGCGATGGAAGCCGCTGGGGGAATACGATTGATGATCGAAGCAAAACTTTCTCCTGGACCTTCCATATGCAATATTCGTCGACATGGTGACAATAGTCGATGGCATGAAGTTGGCGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGATTAAAGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTATCTCGCATGCGTGAGAGACTTGATGGTGGTTGTGTAGTTATTTTAACCAACTTGGGCTACTCCAGCACTGGAGAAGTATTAAATTGCAACACCTATGAAGTCGCAACAGCTTGTGCCTTGGCTATAGGAGCAGACAAGTTGATATGCCTGATAGATGGTCCAATACTTGATGAGAATGGACGCTTAATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGCTAATTCGTAAACGGGCTGAGCAAAGTGAAGCAGCTGCTAACTATGTCAAAGTTGTTGATGAAGAAGGTTTCAACTCTCTTGAATATAACAATTTGAATGGAATAGTCAAATCACCACCTATTGGGCGTTTTACAGAATGGCATAATGCAACCTTCCATAATGGTGTTGGTTTTGAAATTGGAAATGGCTTAGAATCTAGTGAGCAAGGTTTTGCTATTGGAGGTCAAGAGCGGTTAAGTCGAATGCATGGTTACCTGTCAGAGTTGGCTGCTGCCGCTTTTGTTTGCAGAGGTGGCGTTCAAAGAGTTCACTTGCTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGACGGGATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACTCGGACAGCAGAGGTGAAAGATATATCTGGAATAAAACAACTTATTCAGCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATAATGAGCTCTTGCAAACATTGGATTCATTCGTTGTTGTGGAAAGAGAAGGTCACATAATTGCTTGTGCTGCCCTTTTTCCTCACTTTGAGGAGAAGTGCGGAGAGGTTGCTTGCATTGCAGTATCTCCTGATTGTCGTGGCCAAGGGCAGGGTGACAAATTGCTTGATTATATGGAGATGAAAGCATCGCATCTTGGATTGAATATGCTTTTCCTGCTAACAACACGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATTATATTCCTGAAAAGAAAAGGAGAATGATCAATCTTTCTCGCAATTCTAAGTATTATATGAAGAAACTTCTACCAAATAAAAGTGGAATTACTGTTCGTGTAAAATCTGCTTCAAGTTAG 1821 0.4448 MATTTSKPTLSVPFLSHASTPNCHFFHLLSPLATATLPRRSCTFRPHNTKTTAFSRRGCGCHRSRADEDFGSSEEDEEFVKVLRESQPYFSVHSARVFVLLVSAEVVASPCLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLNERGCQPKYVGRYRITDEESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVIKGIDFGSTGEVKKVDVSRMRERLDGGCVVILTNLGYSSTGEVLNCNTYEVATACALAIGADKLICLIDGPILDENGRLIRFLPLQEADMLIRKRAEQSEAAANYVKVVDEEGFNSLEYNNLNGIVKSPPIGRFTEWHNATFHNGVGFEIGNGLESSEQGFAIGGQERLSRMHGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIQPLEASGILVKRTDNELLQTLDSFVVVEREGHIIACAALFPHFEEKCGEVACIAVSPDCRGQGQGDKLLDYMEMKASHLGLNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRMINLSRNSKYYMKKLLPNKSGITVRVKSASS* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0104 606 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 447 594 IPR016181 -
Pvu2g0104 606 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 399 590 IPR010167 GO:0004042|GO:0005737|GO:0006526
Pvu2g0104 606 CDD AAK_NAGS-ABP 78 438 IPR033719 -
Pvu2g0104 606 Pfam Acetyltransferase (GNAT) family 483 549 IPR000182 GO:0016407
Pvu2g0104 606 SUPERFAMILY Carbamate kinase-like 392 440 IPR036393 -
Pvu2g0104 606 Gene3D - 444 590 - -
Pvu2g0104 606 CDD NAT_SF 485 547 - -
Pvu2g0104 606 PANTHER AMINO-ACID ACETYLTRANSFERASE 71 600 IPR010167 GO:0004042|GO:0005737|GO:0006526
Pvu2g0104 606 Gene3D - 77 443 IPR036393 -
Pvu2g0104 606 Pfam Amino acid kinase family 111 331 IPR001048 -
Pvu2g0104 606 PANTHER AMINO-ACID ACETYLTRANSFERASE NAGS2, CHLOROPLASTIC-RELATED 71 600 - -
Pvu2g0104 606 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 444 592 IPR000182 GO:0016407
Pvu2g0104 606 SUPERFAMILY Carbamate kinase-like 77 313 IPR036393 -
Pvu2g0104 606 Hamap Amino-acid acetyltransferase [argA]. 72 590 IPR010167 GO:0004042|GO:0005737|GO:0006526
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0104 Pvu-Chr2 1174044 1185837 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pvu2g0104 AA_kinase 2.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0104 K14682 - gmx:100777694 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0104 2 1174044 1185837 Pvu3g2412 3 45663486 45673405 PCT