Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0090 GCTAAACTCAAGGCTTATATTGAGCAGCATGGCACTGGTGGCAACTGGATAGCCTTGCCCCAGAAAATAGGCCTTAAGAGGTGTGGGAAAAGCTGTCGTCTTAGATGGCTAAATTATCTTCGCCCAAACATCAAACATGGGGGTTTCTCAGAAGAAGAAGACAACATCATCTGCAGCCTTTATGTCAGTATTGGAAGCAGGTGGTCAATTATAGCAGCACAGTTACCAGGGCGAACAGACAATGATATAAAGAACTATTGGAACACTAGGCTAAAGAAGAAGCTTCTTGGCAAACAAAGGAAGGAACAACAGGCTCAAGCTCGCCGTGTCAGCGGCAATCGGCAGAAGCAAGATGTGAAAAGAGAAACCGAGAATTTGATAGTTGCTTCTGAACTCATCAATCAAGTTCCCTACTGGTCTGCCGAATATTCTTCTGTGCCTATGCCAGTGACTGATGTTTCCTTTCAACACTATGGTCTGAACAATCAAACATCTCTCAGAAACTTGATGGTTAACAAACTAGAGGGAATAAGATTTTCCAACGATCATCAGCAGCAGCAGCAGCCATACACCAATGCATGCGAAATTCCCTCCCTGCCAAACCAGGTTTTCCCAACCATGGTAAATCATGTGGCCGTGGTGAGTGATGAAAACAACAGCGTCACTTATCAGCCATCAAATGTATTTCAAGGGTTTGAAAACTTCCCCAGTGATTTTTGTGAACTGGTCTGCGTGAACTCGCAACAAATGGATCGGTCAATGGAGAGTTTTAACTACGGAATGGAATCCATGGACGTCATGAGCAATGGTGGTAGCACCAACACAACTTCAACAGAAAGCACTAGTTGGGGTGACATGAGCTCTTTGGTTTACTCACCTTTGGTCTCTGACTATGAAGGTTGCCGACAAGGAAATCCTCGAGATGTTGTAGCTTTCGAAGAGTGCAAGTACTTTGGAATGCCGATGCAATAA 972 0.4444 AKLKAYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKQRKEQQAQARRVSGNRQKQDVKRETENLIVASELINQVPYWSAEYSSVPMPVTDVSFQHYGLNNQTSLRNLMVNKLEGIRFSNDHQQQQQPYTNACEIPSLPNQVFPTMVNHVAVVSDENNSVTYQPSNVFQGFENFPSDFCELVCVNSQQMDRSMESFNYGMESMDVMSNGGSTNTTSTESTSWGDMSSLVYSPLVSDYEGCRQGNPRDVVAFEECKYFGMPMQ* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0090 323 MobiDBLite consensus disorder prediction 98 120 - -
Pvu2g0090 323 SUPERFAMILY Homeodomain-like 26 95 IPR009057 -
Pvu2g0090 323 ProSiteProfiles Myb-like domain profile. 1 40 IPR001005 -
Pvu2g0090 323 PANTHER OS09G0431300 PROTEIN 190 306 - -
Pvu2g0090 323 PANTHER OS09G0431300 PROTEIN 1 191 - -
Pvu2g0090 323 Gene3D - 1 45 - -
Pvu2g0090 323 Gene3D - 48 124 - -
Pvu2g0090 323 CDD SANT 49 91 IPR001005 -
Pvu2g0090 323 CDD SANT 2 40 IPR001005 -
Pvu2g0090 323 ProSiteProfiles Myb-like domain profile. 41 91 IPR001005 -
Pvu2g0090 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 95 IPR017930 -
Pvu2g0090 323 SMART sant 45 93 IPR001005 -
Pvu2g0090 323 SMART sant 1 42 IPR001005 -
Pvu2g0090 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 40 IPR017930 -
Pvu2g0090 323 PANTHER TRANSCRIPTION FACTOR RAX3-LIKE 1 191 - -
Pvu2g0090 323 PANTHER TRANSCRIPTION FACTOR RAX3-LIKE 190 306 - -
Pvu2g0090 323 Pfam Myb-like DNA-binding domain 47 89 IPR001005 -
Pvu2g0090 323 Pfam Myb-like DNA-binding domain 2 40 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0090 Pvu-Chr2 1000586 1002289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0090 1 292 MYB Transcription Factor Family AT3G49690 44.839 1.23e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu2g0090 Myb_DNA-binding 1.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0090 K09422 - gmx:106795158 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0090 2 1000586 1002289 Pvu3g2390 3 45418410 45419954 PCT