LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu2g0079	ATGCCTCAGCCATTGTTTCTGTTTTTACTTTTATGTACATTGTGCTCAAGTGGTTTATCCCAAACGCTTTCCCTCCAAAGAGAGTCTCGAATTCTACTTCGGGTTAAGAACACCCAGCTTGAAGACAAAAACAAAAGTCTCCAAAACTGGGTACCAAACACAGACCACAACCCCTGCAACTGGACCGGCATTACCTGCGACGCACAAAACCATTCACTTGTCTCCATTGACCTCTCCGAAACTGGAATCTACGGCGAGTTCCCCTTCGGTTTTTGTCACATTCACACCCTCCAAAACCTTTCTCTCGCATCCAATTTTCTCTCCAACTCTGTCTCCCCCAACTCCCTGCTCCTCTGTTCCCACCTTCGTCTCTTGAACCTCTCCGACAATTTCTTCGTTGGAAACCTGCCGGAATTCCCACCGGAGTTCACCGAACTAAGAGTATTAGACCTTTCGACAAACAACTTCACTGGCGACATTCCGGGGAGTTTTGGACAAATTCCACGTCTGAGAGTGCTTGTTTTATTCGGGAACCTTCTGAGCGGAACGATCCCTCCCTCTTTGGGCAGCCTCAGAGAGTTAACTCGTTTGGAATTAGCTTATAACCCCTTCAAACCAGGACCGTTACCTCCCCAACTAGGAAATCTCTCTAGTCTCGAAACACTGTTTCTCGCTGGTGCTAACCTCGTAGGGGAAATTCCACCCACTATCGGGAACCTCACCTCGCTCAAAAACTTGGATTTATCTCAAAACTGTTTGTCTGGTAACATCCCTAACAGCATTTCAGGTCTGAAAAACGTTGAACAAATTGAACTATTTGAAAACCAGCTTTCCGGTGAATTACCCCAAGGTTTAGGAAACCTCAGTAGTTTAATTCTCTTGGATACCTCTCAGAACGCTCTCACAGGAAAACTACCACACGCAATCGCTTCTTTGCGTCTCTATTCTCTCAACCTGAATGACAACCTTCTCGGGGGGGAAATTCCTGAAAGTTTAGCTTCAAACCCCAACCTGCATCAGCTGAAACTCTTCAACAACAGCTTCACCGGGAAACTCCCACAAGATCTGGGACAAAACTCCGACATACAGGAATTCGATGTCTCAACGAATGACTTCGTGGGAGAGTTGCCAAAGTACCTCTGCAAGAGAAACAAGCTCGAGCGTCTCATAACGTTCGGGAATCGCTTCTCCGGAACGCTCCCTGAGCAATACGGGGAGTGTGGTTCACTTCAGTACGTCAGAATCCAGAACAACCAGTTATCAGGTGAGGTGCCACCAACGTTTTGGGCCCTTACTGGGCTTCAGTTTCTTGAAATGTCCAACAACAGGTTTCAAGGTTCTGTCTCTGCTTCCATCTCTACGGCACTCATCAAACTCATTTTGTCTGCTAACGCTTTTTCTGGCAATTTCCCAACGCCAATCTGCCAACTCCCTCACCTTCTGGAGATTGACGTCAGCAAGAACCGCTTCACCGGTGAAGTTCCCACGTGCGTAACTGGGTTGAAAAAGTTACAGAAACTTAAGATGCAAGAGAACATGTTCACCGGCGACATACCCAGTAAAGTGGCCCTCTGGACTGATATGACAGAGTTGAATCTGTCGTTTAACCGATTCTCCGGTTCAATCCCGCGGGAACTTGGCAGTTTACAGGGTTTGACATACCTTGATCTCGCCGGCAATTCTTTAACGGGGGAGATTCCGGTGGAGTTGACGAACCTGAGACTAAACCAGTTCAACGTATCTGATAACAATCTTTACGGGGAGGTACCTTCAGGTTTCAACCAGCAAATGTATTTGTCCAGTCTAGGGGGAAACCCGGGTCTGTGCAGCGCCGTTATCAAAACCCTGCCTCCTTGTTCGAAACGCCGGCCGTTTTCTCTGCTTGCGATTGTCGTTTTAGTTGCCTGCGTTTCGCTCCTTGTGGGATCCATGTTGTGGTTCCTGAAGAGCAAGACGCGCGGTAAATCCAAGCGCTCGTATATGTCAACCGCGTTTCAGAGAGTGGGGTTCAATGAAGAAGACATTGTTTCGAACTTAACCCAGGAGAACGTGATTGGGGCAGGGAGTTCGGGTCGGGTCTATAGGGTGAGGCTGAAGACGGGACAGACGGTGGCAGTGAAGAAGCTGTTCGGCGGTGCACATAAGCCGGACACTGAATTGGTGTTCAGGGCAGAGATTGAGACGTTGGGTAGGATTCGGCATGCGAATATTGTGAAACTGTTGTTTAGTTGCAGTGGTGATGAGTTTAGGGTATTGGTGTATGAGTACATGGAGAACGGGAGCTTAGGGGATGTGTTGCATGGTGAGGAAAGGTGTGGGCAGTTGGAGTGGTCTAGAAGGTTCGCAATCGCGGTGGGTGCGGCTCAGGGGCTGGCTTATTTGCACCATGATTGTGTGCCGCCAATTGTTCACAGGGACGTCAAGAGTAATAACATTTTGCTGGACCATGAGTTTGTGCCAAGAGTCGCAGACTTTGGCCTCGCCAAGACATTGCAGCATCAGACAATCCAGAATGCTGATATGTCTAGGGTTGCGGGATCCTATGGATATATTGCTCCAGAGTACGCTTATACAATGAAAGTGACCGAGAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTGATGGAATTGATCACCGGGAAGAGGCCAAATGACTGTTCATTCGGTGAGAACAAGGATATAGTAAAATGGATCACTGAGATTGTTTTATCAGCATCTCCTGTAAGAGGAAGTCGCAACATGGGAGGAGGTAAATATTATACTATGACCAAGATTGTGGACCCAAGACTGAACCCAACCTCTTGCGACTATGAAGAGGTTAAGAAGGTTTTAAATGTGGCCCTACTCTGCACCTCAGCATTTCCGATTAATAGACCCTCCATGAGAAAGGTTGTTGAATTGCTCAAGGACCACAAACTGCCATGA	2925	0.4773	MPQPLFLFLLLCTLCSSGLSQTLSLQRESRILLRVKNTQLEDKNKSLQNWVPNTDHNPCNWTGITCDAQNHSLVSIDLSETGIYGEFPFGFCHIHTLQNLSLASNFLSNSVSPNSLLLCSHLRLLNLSDNFFVGNLPEFPPEFTELRVLDLSTNNFTGDIPGSFGQIPRLRVLVLFGNLLSGTIPPSLGSLRELTRLELAYNPFKPGPLPPQLGNLSSLETLFLAGANLVGEIPPTIGNLTSLKNLDLSQNCLSGNIPNSISGLKNVEQIELFENQLSGELPQGLGNLSSLILLDTSQNALTGKLPHAIASLRLYSLNLNDNLLGGEIPESLASNPNLHQLKLFNNSFTGKLPQDLGQNSDIQEFDVSTNDFVGELPKYLCKRNKLERLITFGNRFSGTLPEQYGECGSLQYVRIQNNQLSGEVPPTFWALTGLQFLEMSNNRFQGSVSASISTALIKLILSANAFSGNFPTPICQLPHLLEIDVSKNRFTGEVPTCVTGLKKLQKLKMQENMFTGDIPSKVALWTDMTELNLSFNRFSGSIPRELGSLQGLTYLDLAGNSLTGEIPVELTNLRLNQFNVSDNNLYGEVPSGFNQQMYLSSLGGNPGLCSAVIKTLPPCSKRRPFSLLAIVVLVACVSLLVGSMLWFLKSKTRGKSKRSYMSTAFQRVGFNEEDIVSNLTQENVIGAGSSGRVYRVRLKTGQTVAVKKLFGGAHKPDTELVFRAEIETLGRIRHANIVKLLFSCSGDEFRVLVYEYMENGSLGDVLHGEERCGQLEWSRRFAIAVGAAQGLAYLHHDCVPPIVHRDVKSNNILLDHEFVPRVADFGLAKTLQHQTIQNADMSRVAGSYGYIAPEYAYTMKVTEKSDVYSFGVVLMELITGKRPNDCSFGENKDIVKWITEIVLSASPVRGSRNMGGGKYYTMTKIVDPRLNPTSCDYEEVKKVLNVALLCTSAFPINRPSMRKVVELLKDHKLP*	975

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu2g0079	974	Pfam	Leucine rich repeat N-terminal domain	28	67	IPR013210	-
	Pvu2g0079	974	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	802	814	IPR008271	GO:0004672\|GO:0006468
	Pvu2g0079	974	SMART	serkin_6	679	974	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu2g0079	974	Gene3D	Ribonuclease Inhibitor	179	284	IPR032675	-
	Pvu2g0079	974	Gene3D	Ribonuclease Inhibitor	24	178	IPR032675	-
	Pvu2g0079	974	Pfam	Protein kinase domain	681	890	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu2g0079	974	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2	6	972	-	-
	Pvu2g0079	974	Pfam	Leucine rich repeat	145	203	IPR001611	GO:0005515
	Pvu2g0079	974	Pfam	Leucine rich repeat	218	277	IPR001611	GO:0005515
	Pvu2g0079	974	ProSiteProfiles	Protein kinase domain profile.	679	974	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu2g0079	974	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	6	972	-	-
	Pvu2g0079	974	Gene3D	Ribonuclease Inhibitor	293	622	IPR032675	-
	Pvu2g0079	974	Gene3D	Phosphorylase Kinase; domain 1	653	756	-	-
	Pvu2g0079	974	SUPERFAMILY	RNI-like	352	609	-	-
	Pvu2g0079	974	SUPERFAMILY	RNI-like	75	422	-	-
	Pvu2g0079	974	SUPERFAMILY	Protein kinase-like (PK-like)	670	968	IPR011009	-
	Pvu2g0079	974	ProSitePatterns	Protein kinases ATP-binding region signature.	685	708	IPR017441	GO:0005524
	Pvu2g0079	974	Gene3D	Transferase(Phosphotransferase) domain 1	757	973	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu2g0079	Pvu-Chr2	905606	909891	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu2g0079	28	972	Receptor kinase-like Gene Family	AT5G65710	57.143	0.0	1053

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-1	Pvu2g0079		Pkinase	6.2e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu2g0079	-		-	gmx:100813889	1585.08