Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0077 ATGCGTGTCCTCTTTCTGTTTCTGTTTTTCCATCTTCCTCAAACCCTTTCCTTGCCATTCTCAGAGTACACAGCCCTTCTCTCTCTTCGTTCAGCCATTACCGATGCCACTCCACCCGTTCTCTCTTCGTGGAACGCCTCCACCTCTTATTGCTCCTGGCTCGGCGTCACATGCGACTCCCACCGCCACGTCATTGCTCTCAACCTCACTGGACTCGACCTCTCCGGGACTCTCTCCGCCGACATAGCTCACCTCCCATTCCTCTCCAATCTCTCGCTAGCCACCAATAAGTTCTCCGGCCCCATCCCTCCGGCACTCTCCTCCCTCTCTTCCCTCCGCCTCCTCAATCTCTCCAACAATGGCTTTAACCAAACCTTCCCTCCGGAGCTCTCGCGCCTCCAGAGCCTCGAGGTCCTCGACCTCTACAACAACAACATGACCGGCGCGCTCCCTCTCGCCGCCGCGCAGATGCTCAACCTCCGCCACTTGCATCTCGGCGGGAACTTTTTCTCGGGCCGGATCCCGCCGGAGTACGGACAGTGGCAGCGCCTCGAGTACCTTGCTGTCTCCGGAAACGAGCTCGAAGGGAAAATACCGCCAGAGATCGGGAACCTGACCAGCCTCCGGGAGCTTTACATCGGCTACTACAATACTTACGAGGGCGGCATTCCGCCGGAGATCGGAAACTTGTCGGAGCTGGTGAGACTGGACGCTGCGTACTGTGGTTTGTCCGGCGAGATTACTGCGGCGCTGGGTAAGCTGCAGAAGCTGGACACGCTGTTCCTTCAGGTGAATGCGCTATCAGGGCCTCTCACGCCGGAGCTGGGAAACCTGAAGAGCTTGAAATCGATGGATTTGTCTAACAACATGCTCTCCGGGGAGATTCCGGCGACTTTCAGCGAGCTGAAGAATATTACGCTGCTGAACCTGTTCAGGAACAAGCTTCATGGAGCAATACCGGAGTTTATAGGGGAACTTCCGTCGCTGGAAGTGGTGCAATTGTGGGAAAACAATTTCACAGGTAGCATTCCTGAGGGTTTAGGCAAGAACGGGAGACTGAGCGTTCTTGATATTTCTTCTAACAAATTAACTGGGGCTCTGCCTCCTTACCTCTGTTCTGGGAACACACTTCAGACTTTGATAACTCTCGAGAATTTCTTGTTCGGTCCAATTCCGGAAGCGCTTGGGAGTTGTGAATCCCTTACTCGGATTCGAATGGGAGAGAACTTTCTAAATGGGTCCATTCCGAAAGGGCTTTTTGGACTTCCCAAACTTACCCAGGTTGAGCTTCAGGATAATTATCTCTCTGGAGGGTTTCCGGAGGCGGGTTCTGTAGCTGTTAATCTTGGTCAGATAACTCTCTCCAACAACCAGCTTTCTGGGCCTTTGCCTCCTTCCATCGGTAACTTCTCCAGCGTGCAAAAGCTCCTTCTTGACGGTAACATGTTTTCGGGTCCGATCCCTCCTCAGATTGGGAGGTTGCAACAGCTCTCAAAGATTGACTTTAGTGGCAACAAGTTCTCGGGTCGTATTGAACCTGAAATCAGTCAGTGTAAGTTGTTAACTTTTCTAGACCTTAGCCGGAATGATCTCTCCGGAGAGATCCCAAATGAGATTACTGGAATGAGGATATTGAATTGCCTTAATCTCTCAAGCAATCATTTAGTGGGTAGCATTCCCTCTTCAATATCCTCGATGCAAAGTTTAACTTCTGTTGATTTTTCGTACAACAATCTGTCTGGTTTGGTGCCCGGTACCGGTCAATTCAGCTACTTCAACTACACGTCTTTCTTGGGAAACCCCGACCTCTGTGGCCCCTATTTAGGTGCTTGCAAGGATGGGGTTGCCAATGGTGCACATCATCCTCATGCGAAAGGACTCTCGTCTTCTTTGAAGCTTCTACTTGTTGTCGGGTTGCTTCTATGTTCCATTGCTTTTGCTGTGGCGGCAATATTTAAGGCTCGATCACTGAAGAAGGCCAGTGATGCTCGTGCATGGAAGTTGACTGCGTTTCAACGTTTGGAATTCACTGTTGATGATGTTTTGCAGTGCTTGAAGGAGGATAATATTATAGGCAAAGGAGGTGCAGGCATTGTCTACAAAGGGGCTATGCGTAACGGGGATCATGTTGCTGTGAAAAGGCTTCCGGCTATGAGTAGAGGCTCTTCCCACGACCATGGGTTCAACGCAGAGATTCAGACACTTGGGCGAATCCGACACAGGCACATTGTTAGATTGTTGGGTTTCTGTTCAAATCATGAGACTAACCTTTTGGTCTATGAGTACATGCCCAATGGAAGCTTGGGTGAGGTTCTTCATGGAAAGAAGGGGGGTCATTTGCATTGGGACATAAGGTATAAAATTGCCGTGGAGGCTGCCAAAGGGCTTTGCTATCTCCACCATGATTGTTCTCCGCTCATTGTTCACCGTGATGTGAAGTCAAACAACATCCTTCTTGATTCTAATCATGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTCCTGCAAGATTCTGGGACATCTGAATGCATGTCTGCTATTGCTGGTTCATATGGATACATAGCTCCAGAGTATGCCTACACATTGAAAGTTGATGAGAAAAGCGATGTGTACAGTTTTGGCGTGGTTCTTTTAGAACTTATCACAGGCAGGAAACCAGTTGGGGAATTTGGTGACGGTGTGGACATTGTGCAATGGGCAAGGAAAATGACGGACTCTAACAAGGAAGAAGTTCTTAAAGTTCTTGATCCTAGGCTTTCGTCAGTTCCCCTCCACGATGTGATGCATGTTTTCTATGTAGCCATGCTATGTGTGGAAGAACAGGCTGTAGAGAGACCAACTATGCGTGAAGTTGTCCAAATACTGACAGAGCTTCCAAGACCACCTGGTTCTAAACAGGAAGACTTAACAGAATCCTCTTTGTCATCATCCAATGCTTTAGAATCTCCATCCACAGCCTCTAAAGATCGTCAAAATCCTTCTCAATCTCCACCACCCGATCTTCTGAGCATTTAA 3018 0.4917 MRVLFLFLFFHLPQTLSLPFSEYTALLSLRSAITDATPPVLSSWNASTSYCSWLGVTCDSHRHVIALNLTGLDLSGTLSADIAHLPFLSNLSLATNKFSGPIPPALSSLSSLRLLNLSNNGFNQTFPPELSRLQSLEVLDLYNNNMTGALPLAAAQMLNLRHLHLGGNFFSGRIPPEYGQWQRLEYLAVSGNELEGKIPPEIGNLTSLRELYIGYYNTYEGGIPPEIGNLSELVRLDAAYCGLSGEITAALGKLQKLDTLFLQVNALSGPLTPELGNLKSLKSMDLSNNMLSGEIPATFSELKNITLLNLFRNKLHGAIPEFIGELPSLEVVQLWENNFTGSIPEGLGKNGRLSVLDISSNKLTGALPPYLCSGNTLQTLITLENFLFGPIPEALGSCESLTRIRMGENFLNGSIPKGLFGLPKLTQVELQDNYLSGGFPEAGSVAVNLGQITLSNNQLSGPLPPSIGNFSSVQKLLLDGNMFSGPIPPQIGRLQQLSKIDFSGNKFSGRIEPEISQCKLLTFLDLSRNDLSGEIPNEITGMRILNCLNLSSNHLVGSIPSSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGACKDGVANGAHHPHAKGLSSSLKLLLVVGLLLCSIAFAVAAIFKARSLKKASDARAWKLTAFQRLEFTVDDVLQCLKEDNIIGKGGAGIVYKGAMRNGDHVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDIRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNHEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWARKMTDSNKEEVLKVLDPRLSSVPLHDVMHVFYVAMLCVEEQAVERPTMREVVQILTELPRPPGSKQEDLTESSLSSSNALESPSTASKDRQNPSQSPPPDLLSI* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0077 1005 Pfam Protein tyrosine and serine/threonine kinase 687 956 IPR001245 GO:0004672|GO:0006468
Pvu2g0077 1005 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 995 - -
Pvu2g0077 1005 SMART serkin_6 685 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0077 1005 SMART LRR_typ_2 109 133 IPR003591 -
Pvu2g0077 1005 SMART LRR_typ_2 326 350 IPR003591 -
Pvu2g0077 1005 SMART LRR_typ_2 566 589 IPR003591 -
Pvu2g0077 1005 SMART LRR_typ_2 157 181 IPR003591 -
Pvu2g0077 1005 SMART LRR_typ_2 494 518 IPR003591 -
Pvu2g0077 1005 SMART LRR_typ_2 278 302 IPR003591 -
Pvu2g0077 1005 SMART LRR_typ_2 351 374 IPR003591 -
Pvu2g0077 1005 ProSiteProfiles Protein kinase domain profile. 685 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu2g0077 1005 Gene3D Ribonuclease Inhibitor 322 617 IPR032675 -
Pvu2g0077 1005 SUPERFAMILY RNI-like 67 387 - -
Pvu2g0077 1005 Pfam Leucine rich repeat N-terminal domain 22 59 IPR013210 -
Pvu2g0077 1005 Gene3D Phosphorylase Kinase; domain 1 650 762 - -
Pvu2g0077 1005 MobiDBLite consensus disorder prediction 967 1005 - -
Pvu2g0077 1005 SUPERFAMILY L domain-like 295 611 - -
Pvu2g0077 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Pvu2g0077 1005 MobiDBLite consensus disorder prediction 957 1005 - -
Pvu2g0077 1005 Pfam Leucine Rich Repeat 280 302 IPR001611 GO:0005515
Pvu2g0077 1005 Pfam Leucine Rich Repeat 159 176 IPR001611 GO:0005515
Pvu2g0077 1005 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 995 - -
Pvu2g0077 1005 SUPERFAMILY Protein kinase-like (PK-like) 681 956 IPR011009 -
Pvu2g0077 1005 Gene3D Ribonuclease Inhibitor 21 128 IPR032675 -
Pvu2g0077 1005 Gene3D Transferase(Phosphotransferase) domain 1 763 978 - -
Pvu2g0077 1005 Gene3D Ribonuclease Inhibitor 217 317 IPR032675 -
Pvu2g0077 1005 Gene3D Ribonuclease Inhibitor 129 216 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0077 Pvu-Chr2 878645 882943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0077 15 984 Receptor kinase-like Gene Family AT5G65700 79.817 0.0 1576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu2g0077 PK_Tyr_Ser-Thr 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0077 - - gmx:547593 1803.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0077 2 878645 882943 Pvu3g2381 3 45294634 45298812 PCT