Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0070 ATGTCTATGGCTGGTTTGGATTTAGGCACGGCTTCGCGCTTCGTTCAAAGTCTCCAAAGACCAGACTTCAACCACCATCACCACCACCAGCAAGAATCCGAGGAAGACGCCAAACAGTCGGACCCTTTCTCGACTGAAGATGGGGCGCAACAAGGCAGCCCCGGCGACGTGGGCGGGCGGCGGCCAAGAGGGCGGCCGCAGGGGTCGAAAAACAAGCCCAAGCCGCCTGTGATCATCACCAGGGAGAGCGCCAACACGCTCCGCGCGCACATCCTCGAGGTGGGCAGCGGCTGCGACGTGTTCGACAGCGTTGCCAGCTACGCGCGGCGGCGGCAGCGCGGGATCTGTATCTTGAGCGGCAGCGGCACCGTGACAAATGTGAGCCTGCGGCAGCCGGCGGCGTCGGGGGCGGTGGTGACTCTTCACGGGAGGTTCGAGATACTGTCCCTGACGGGATCGTTCCTTCCTCCGCCGGCGCCACCGGGCGCCACAAGCCTGAGCGTTTACCTGGCTGGAGGCCAGGGACAGGTGGTGGGTGGGAGTGTGGTGGGAGAGTTGACCGCGGCGGGACCTGTGATTGTGATGGCAGCGTCGTTCACCAACGTGGCTTATGAACGGTTACCCTTAGAAGAAGAAGAAGAGGAACAGGTTCAGATATCTGGTGGTGCTGGTGTGGGAAATAATAGTAATAATAATATTATTAACAATAACCCTTTTCCTGATCCTTCTTCGGGACTCCCTTTCTTCAGTTTGCCCATGAATGTTCAGTTCCCGGTGGATGGTTGGACGGGAAACTCAGCTTCTCGTTCACCATTTTGA 819 0.5861 MSMAGLDLGTASRFVQSLQRPDFNHHHHHQQESEEDAKQSDPFSTEDGAQQGSPGDVGGRRPRGRPQGSKNKPKPPVIITRESANTLRAHILEVGSGCDVFDSVASYARRRQRGICILSGSGTVTNVSLRQPAASGAVVTLHGRFEILSLTGSFLPPPAPPGATSLSVYLAGGQGQVVGGSVVGELTAAGPVIVMAASFTNVAYERLPLEEEEEEQVQISGGAGVGNNSNNNIINNNPFPDPSSGLPFFSLPMNVQFPVDGWTGNSASRSPF* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0070 272 MobiDBLite consensus disorder prediction 221 237 - -
Pvu2g0070 272 MobiDBLite consensus disorder prediction 17 78 - -
Pvu2g0070 272 MobiDBLite consensus disorder prediction 20 42 - -
Pvu2g0070 272 MobiDBLite consensus disorder prediction 218 237 - -
Pvu2g0070 272 Gene3D - 87 222 - -
Pvu2g0070 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 272 IPR014476 GO:0003680
Pvu2g0070 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 218 - -
Pvu2g0070 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 3 272 - -
Pvu2g0070 272 ProSiteProfiles PPC domain profile profile. 84 220 IPR005175 -
Pvu2g0070 272 CDD DUF296 88 171 IPR005175 -
Pvu2g0070 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 88 201 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0070 Pvu-Chr2 762566 763876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0070 3 272 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 62.914 4.72e-94 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0070 - - gmx:100818680 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0070 2 762566 763876 Pvu3g2373 3 45100342 45101199 PCT