Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0020 ATGGATCCATGGAACCTTTGCACTTCCAAGTTTCTCTCTGAACAGGTTGCTTACCCTTCTCATCTCCACGCAGAAAAGGTTCCCAACATGGGAAATTCCAGTGGTGTGACCAAGGAGCTCAGAGGTTCGCAGATGACAATCTTTTATGATGGCCAAGTTGTTGTCTTTGACGATATGCAAGCTGAGAAAGCCAAGGATATCATCATGTCTTTTGCCAACACAGGAATGTCTCAAAACCAGAACGGCTATGCTTACTCATACCCTGCTGCAATTTCTGCTACTTCCAGTAGACCGTTTCCTTTTCTTATGAATATCATCCCTACCACTACAAACAATTCGGTTCAGGAGCACCCTCAAGCACCATCTAAATCTGTTATATGTGATCTACCTTTGGCTAGAAAAGCTTCACTTCATCGGTTCTTGGAGAAAAGAAAAGATAGAATTGCTGCCAGAGCACCATATCAAACAAGCAATCACAAGGCAACCCTTAATAAGGCAGGTGAATCCATGCCATGGCTCACCTTGGCACCTAAATCGCCACAAGACGAATCTGATTCTGATAGCAGCTCCAGCTTTGTGTTACTTTAG 588 0.4388 MDPWNLCTSKFLSEQVAYPSHLHAEKVPNMGNSSGVTKELRGSQMTIFYDGQVVVFDDMQAEKAKDIIMSFANTGMSQNQNGYAYSYPAAISATSSRPFPFLMNIIPTTTNNSVQEHPQAPSKSVICDLPLARKASLHRFLEKRKDRIAARAPYQTSNHKATLNKAGESMPWLTLAPKSPQDESDSDSSSSFVLL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0020 195 MobiDBLite consensus disorder prediction 168 195 - -
Pvu2g0020 195 Pfam Jas motif 130 155 IPR018467 -
Pvu2g0020 195 PANTHER PROTEIN TIFY 10A 12 176 - -
Pvu2g0020 195 SMART tify_2 38 74 IPR010399 -
Pvu2g0020 195 Pfam tify domain 43 69 IPR010399 -
Pvu2g0020 195 MobiDBLite consensus disorder prediction 179 195 - -
Pvu2g0020 195 ProSiteProfiles Tify domain profile. 38 73 IPR010399 -
Pvu2g0020 195 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 12 176 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0020 Pvu-Chr2 206742 208210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0020 36 176 Tify Gene Family AT1G19180 40.559 3.99e-22 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pvu2g0020 tify 2.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0020 K13464 - gmx:100800709 286.96