Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0016 ATGACAACACCAGAAAATAATGGTCATTGTAAAGAAGAAAGATATGACTCATTGATGGAGGATGGGCACACTTTCCTTCTTAGGCCGGTGTATAAGCGGCGTAAAGTTTCCGCCATTCGTGATTTCCCTGATGGATGTGGACCATCTGCTTCAAGGATTGAGGAAGTATCAAATATAAATATTGCAGATTGTGGTTCTGTTAATGGTACAATTGTTGAGGTTAAGAACGGTGAACATTTAGCAGGTGTGAAAACCTGTGAAAATGATGGTTGGCATTCTGAGCCAAACAATTTGCTTTATACGGAGACTCTTGGCGTAACAGTTGACAGTGGTTTGAATAAGGACAACCCCATGGTCTCATCCTATCATGTGGATGGATCTACTGCTGAAGACAGACTGGAAATAGGGACTCTTAGCCAAACTGCTGATCGTGGATATACTGCTGAAGATAAACCAGGAATGATGACTATTAGCCAAACCTCTGATTGTGGTTTGAACCAGGAAAGCCCTGTAGATTCATCTCATAGAGTGGATGGACATATTGCCGAAGGCGAAGCTGCAAAAGTGACTCTTGGTTTGAATCAGGAAAACCCTGTGGTCTCATCTCATCAAGTGGATGGGTCTACTCCGGAAGATAACCCTGCAAAAGTGAAGCTTGGCCAAACAAAGGACTGCAGTTTGAATCTGGAAAACTCTGAGGTCTCATCACATCAAGTGAATGGGTCTATTGCAGAAGATGAACTTACAAAAGTGACTATTGTTGAGCGAACAACTGACTGTGGTTTGAATAAGGAAAACCTTGTGGTCTCGTGTCGTCAAGTGGACAGCCCTACTGCAGAAGATAAACCTGCAAAAGTGCCTTCTTTGGACCCGGAAACTTTGAATACAGAGTTTGCAAGAACATCAAACACTGGAAAATGTGACTCCTCTTATGAGTTGAAGTCATCTTCTCCAGCGGGTGAGATTGCTGTGCCCGGGGATTCGAAACACTTATTATCCAATGCCAATATATCTGCTCCCAGTGCATGTATGGTGGAACCTATAACTAGAAGGTATCTTCCACAAAGAAAAGTTTCAGCTGTTAGAGACTTTCCTCCTTTATGTGGACGTAATGCTCCACGTGTCGGTAAGGACAAGCATGTGTGTCTAGAGGGGACCTCTTCTTTGGATAACAAGACAGATGGTCAACGGAACCTGGCTGTAGATGACAATTCATTGAAAAAAGTAACAGCTACTGATGTAAAAGAAGGTAAAAGTAACATTCAGGATGAATATAATTGCAATAGAAAGGTTGTTGACATCGATCAACCTGATTCTGAAAGAAATGCTGCAGAGAGATTGAAAAAGCTCCAGGCATGTGAACTATCGTCTGAGATGAAAAAGTCACCAGAAAATGAGAGAGAAAGGTATGCTACTCCCCCTGCAACAAGTAATCATCATCAGATCAAATTAAATTCTAAGGCGGTGGTAAAAGAGAATAATAGGGTCGAGACAAAGCCTTTGAGTATATCTCGTTCTAACCATAAGTTGAAAGGGAATTTTAATAGATTGCAGGTCTCATCACAGAGGAAAGTAATACTAGGTTTGATGGCTGATTCAGAATGTCCGTGGAGATCTGATAAAGGTTCCTCCAAATCTAAGTTGGTTGTTGGTAATAGTAAAGGCAAGAGAAAGAAAGGGGATTCTTTTGCATTGCCTGATAGGTCTAAAACAGATATCAAGATTACAGGTGCCTTGAATGATTCTGAGAAGAAGCCTTTGAAAAAGAAAAAGGGAAATGCTGCTTCCGAAGGTATGGGTGAATTAGTACTTTGGGAAAAGGATAATTATCTTGAGCAGCCTAATGAATGTGATAACACTCTTCAAATTGTCCTGAGATCAAATGAGTTCGATGTAAACATTACTCCCTCTTCTCATTCTAATTTCACTGGTGATGAGAATGACCCAAATGTGACCCGAAAAAAAGTGAGGGAAACATTACGGTTGTTTCAAGTTATTTGTAGAAAGCTTTTACAGGAAGTAGAATCAAAGTTAAATGAGCGAGCCAATAGTAAGAGAGTTGATTTAGTAGCTTCAAGGATCCTTAAGGAGAATGGGAAATATGTCAACATAGGCAAGCAAATACTAGGCTGTGTTCCTGGTGTTGAAGTTGGTGATGAATTTCAATATAGAGTGGAGCTTAATATAGTTGGCCTTCACCGTCCAATTCAAGGTGGGATAGATTATGTGAGACACAATGGTATGATCCTTGCAACCAGTATTGTTGCATCAGGGGCCTATGCTGATGAGTTGGATAATTCGGATGTGTTGACATATACAGGGCAGGGCGGAAATGTGATGAACAATGATAAAAACCCTGAAGATCAGAAGCTTGAGCGGGGCAATCTTGCTTTGATGAACAGTAGTGTTGAAAAGAATCCTGTTAGAGTAATTCGTGGCTCTGAGTCAATGGATGGAAAGTGTAGGACTTATGTTTATGATGGACTGTACATAGTTGAGTCAGGTTGGGATGAACACGGACCACATGGGAAGAAAATTTTTAAGTTTCGACTGCGAAGAGAAGCTGGTCAACCAGAGCTTCCTTTTAGAGAAGTGAAGAAATCTAAGAAGTTCAAAACTAGAGAAGGTATATGTGTTGCTGATATTTCTTTTGGAAAAGAACGAATTCCGATATGTGCTGTGAACACCATAGATGATGAAAAACCTCCTCCGTTTAATTACATAACTAGCATGATATACTCCAAATTCAATCTCGTTCTTGCCGAAGGATGTGATTGTATTAATGGATGCTCAGATTCGGAGAAATGTTCGTGTGTAGTGAAAAACGGGGGAGAGATTCCATTCAATCACAATGAAGCTATTGTACAAGCAAAGCCTCTAGTCTATGAGTGTGGACCTACATGCAAGTGTCCTTCTACGTGCCATAATAGAGTCAGCCAACTTGGCATAAAGTTTCAGCTTGAAATATTTAAAACCAATACAAGGGGATGGGGTGTGAGATCCCTTAGTTCAATCCCTTCAGGAAGTTTTATCTGTGAATATATAGGGGAGCTTCTTGAAGAAAAGGAAGCTGAACTAAGGGCAGGTAATGATGAGTATCTTTTTGATATTGGAAATAACTACAGCAACAGTGCTCTCTGGGATGGTCTTTCGACTCTCATGCCGGATGCACAGACAAGTTCATGCGATGTTGTGAAGGATGGTGGTTTTACTATTGATGCTGCTGAGTTTGGCAACGTAGGGAGATTCATTAACCATAGTTGCTCCCCTAATATAATTGCTCAGAACGTCCTTTCTGATCATCATGACACCAGAATGCCTCACATAATGTTCTTTGCTGCTGATAACATTCCTCCTTTGCAAGAGCTGACTTACGATTACAATTACGAAATAGATCAAGTCTTTGATTCTGATGGCAATATAAAAAGGAAGTATTGTTACTGTGGTTCTGCTGAATGTACTGGCAGGATGTATTGA 3477 0.4061 MTTPENNGHCKEERYDSLMEDGHTFLLRPVYKRRKVSAIRDFPDGCGPSASRIEEVSNINIADCGSVNGTIVEVKNGEHLAGVKTCENDGWHSEPNNLLYTETLGVTVDSGLNKDNPMVSSYHVDGSTAEDRLEIGTLSQTADRGYTAEDKPGMMTISQTSDCGLNQESPVDSSHRVDGHIAEGEAAKVTLGLNQENPVVSSHQVDGSTPEDNPAKVKLGQTKDCSLNLENSEVSSHQVNGSIAEDELTKVTIVERTTDCGLNKENLVVSCRQVDSPTAEDKPAKVPSLDPETLNTEFARTSNTGKCDSSYELKSSSPAGEIAVPGDSKHLLSNANISAPSACMVEPITRRYLPQRKVSAVRDFPPLCGRNAPRVGKDKHVCLEGTSSLDNKTDGQRNLAVDDNSLKKVTATDVKEGKSNIQDEYNCNRKVVDIDQPDSERNAAERLKKLQACELSSEMKKSPENERERYATPPATSNHHQIKLNSKAVVKENNRVETKPLSISRSNHKLKGNFNRLQVSSQRKVILGLMADSECPWRSDKGSSKSKLVVGNSKGKRKKGDSFALPDRSKTDIKITGALNDSEKKPLKKKKGNAASEGMGELVLWEKDNYLEQPNECDNTLQIVLRSNEFDVNITPSSHSNFTGDENDPNVTRKKVRETLRLFQVICRKLLQEVESKLNERANSKRVDLVASRILKENGKYVNIGKQILGCVPGVEVGDEFQYRVELNIVGLHRPIQGGIDYVRHNGMILATSIVASGAYADELDNSDVLTYTGQGGNVMNNDKNPEDQKLERGNLALMNSSVEKNPVRVIRGSESMDGKCRTYVYDGLYIVESGWDEHGPHGKKIFKFRLRREAGQPELPFREVKKSKKFKTREGICVADISFGKERIPICAVNTIDDEKPPPFNYITSMIYSKFNLVLAEGCDCINGCSDSEKCSCVVKNGGEIPFNHNEAIVQAKPLVYECGPTCKCPSTCHNRVSQLGIKFQLEIFKTNTRGWGVRSLSSIPSGSFICEYIGELLEEKEAELRAGNDEYLFDIGNNYSNSALWDGLSTLMPDAQTSSCDVVKDGGFTIDAAEFGNVGRFINHSCSPNIIAQNVLSDHHDTRMPHIMFFAADNIPPLQELTYDYNYEIDQVFDSDGNIKRKYCYCGSAECTGRMY* 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0016 1158 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 570 1158 IPR025794 GO:0016571
Pvu2g0016 1158 MobiDBLite consensus disorder prediction 537 567 - -
Pvu2g0016 1158 SMART set_7 985 1134 IPR001214 GO:0005515
Pvu2g0016 1158 SMART G9a_1 705 857 IPR003105 -
Pvu2g0016 1158 SMART preset_2 879 969 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu2g0016 1158 MobiDBLite consensus disorder prediction 456 479 - -
Pvu2g0016 1158 ProSiteProfiles YDG domain profile. 710 853 IPR003105 -
Pvu2g0016 1158 Gene3D - 693 873 IPR036987 -
Pvu2g0016 1158 SUPERFAMILY SET domain 869 1135 IPR046341 -
Pvu2g0016 1158 Gene3D SET domain 874 1158 IPR046341 -
Pvu2g0016 1158 Pfam Pre-SET motif 882 977 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu2g0016 1158 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 610 1157 - -
Pvu2g0016 1158 Pfam SAD/SRA domain 709 857 IPR003105 -
Pvu2g0016 1158 ProSiteProfiles SET domain profile. 985 1128 IPR001214 GO:0005515
Pvu2g0016 1158 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 610 1157 - -
Pvu2g0016 1158 Pfam SET domain 996 1128 IPR001214 GO:0005515
Pvu2g0016 1158 ProSiteProfiles Post-SET domain profile. 1142 1158 IPR003616 -
Pvu2g0016 1158 ProSiteProfiles Pre-SET domain profile. 922 982 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu2g0016 1158 SUPERFAMILY PUA domain-like 692 867 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0016 Pvu-Chr2 121769 126604 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0016 650 1155 Su(var)3-9 homologs AT5G04940 41.143 1.10e-113 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu2g0016 SAD_SRA 5.7e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0016 K11420 - gmx:100803378 1409.82