Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0015 ATGGGTAAACAAGGTCCTTGCTATCACTGTGGAGTTACAAGCACACCACTCTGGCGCAATGGACCACCTGAGAAGCCAGTACTATGCAATGCATGCGGGTCTCGGTGGAGGACAAAGGGAACTCTTGCAAATTATACCCCCTTACATGCTCGAACAGAAACTGATGCTTGTGGAGATCAAAGGGTTTCCAGGGTAAAGAGCATATCAAATAAGAAGAGAGAAGTGACATTGCTCAAACAAAATAATAACCATGATAATGTACTTTCTGGAGGGTTTGCATCTGATTATAACCAGGGAGGTCAAATCTTCTTGGATGAAGATGTAAGCAACCGATCAAGTTCTGGATCAGCTATCTCTAACTCAGAGAGCTGTGCACAATATGGTGTCATGGATGCTTGTGATCTGACAGGTCCTGCCCAGTCAGTGGTTTGGGATGCCATGGTGCCTTCAAAAAAGAGGACATGCGTTAGCCGTCCAAAGCCTTCTTCTGTTGAGAAGCTAACAAAAGATTTATGTACTATTCTTCATGAACAACAGTCTTATTTTTCTGCATCTTCTGAAGAAGATCTTCTTTTTGAAAGTGAAACACCAATGGTCTCTGTTGAGATAGGACATGGAAGCATTCTCATCAGGCATCCTAGCTATATAGTCCGTGAAGAAGAGTCTGAGGCTAGTTCTTTTTCAGTTGATAATAAACAATGGCCAACGAGTGAGGCATATTCTTATGTTGGTCCCATTCTAATGCATAATGATTCTAGTTACTTGAAACCATCATCTCTGGAAGTCGAAAAGATCAGGAACTATACTGGCTTAGGAAAGGAGCCGGAGCACCATAAAAGTGAAAAGTCTCAACATGAAAGAGTACAAAACCTTGGCAATCATGAATCACCACTGTGCTCTATAGATTTAAATGATATAGTAAACTATGAAGAGTTTTTGAGAATCTTGACAAATGAAGAGCAACAACAGTTACTGAAGTTACTTCCAGTGGTTGATACTGCTAAACTTCCTGATAGCCTTAAAGTCATGTTCAATAGTTCTCAATTCAAGGAGAACTTAACTTATTTTCAGCAGCTTCTTGCGGAAGGAGTTTTTGATATCTCTTTGTTGGGGGCAAAACCTGAAGACTGCAAGACTTTGAAAAGACTTGCAATATCCAATCTGTCAAAGTCAAAATGGGTAGAACACTATAATTTTCTCAAGAAATATGAAAACAAAGATGGCAAATTTGATTCTTTTGGATCTGCTAGTACAACATCCACTAATGTTGCAAACAAGAGAACACGTGACAGCAGAAATCAAAACTTTCCAGAATTGCATACAGTAATGAGGAGCCCCAAAAGAATGACCACCAAGGCTGGCTGTGAGGGAAAAGAGGGGGTAGAAGATGGTGCTTGCTATAGTCCAAAAAGCCTATTTGCTTTGCCTCCTGATGCTAGTTCACTCATGTTTGGTTCTTTAAACTTTGTTGAGGAGATTGGTGACCAGGATCTGCTGCTAGAGGTGCCATCTAACACTTCTTTTCCCCAGGCAGAGCTCTTGCACCCAAGTTTAAGCCTTGGTGCTCAAGCCAGCACTAGTAGTAGCTCAGTCTACTCACATCTTCTTCATCATTAA 1617 0.41 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARTETDACGDQRVSRVKSISNKKREVTLLKQNNNHDNVLSGGFASDYNQGGQIFLDEDVSNRSSSGSAISNSESCAQYGVMDACDLTGPAQSVVWDAMVPSKKRTCVSRPKPSSVEKLTKDLCTILHEQQSYFSASSEEDLLFESETPMVSVEIGHGSILIRHPSYIVREEESEASSFSVDNKQWPTSEAYSYVGPILMHNDSSYLKPSSLEVEKIRNYTGLGKEPEHHKSEKSQHERVQNLGNHESPLCSIDLNDIVNYEEFLRILTNEEQQQLLKLLPVVDTAKLPDSLKVMFNSSQFKENLTYFQQLLAEGVFDISLLGAKPEDCKTLKRLAISNLSKSKWVEHYNFLKKYENKDGKFDSFGSASTTSTNVANKRTRDSRNQNFPELHTVMRSPKRMTTKAGCEGKEGVEDGACYSPKSLFALPPDASSLMFGSLNFVEEIGDQDLLLEVPSNTSFPQAELLHPSLSLGAQASTSSSSVYSHLLHH* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0015 538 Gene3D - 287 391 IPR038108 -
Pvu2g0015 538 PANTHER OSJNBB0038F03.10 PROTEIN 1 538 IPR044589 -
Pvu2g0015 538 Pfam Asx homology domain 278 391 IPR028020 -
Pvu2g0015 538 PANTHER GATA TRANSCRIPTION FACTOR 26 1 538 - -
Pvu2g0015 538 SMART GATA_3 1 53 IPR000679 GO:0006355|GO:0043565
Pvu2g0015 538 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Pvu2g0015 538 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Pvu2g0015 538 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
Pvu2g0015 538 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Pvu2g0015 538 Gene3D - 3 84 IPR013088 GO:0006355|GO:0008270
Pvu2g0015 538 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
Pvu2g0015 538 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 294 406 IPR044867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0015 Pvu-Chr2 110266 116534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0015 1 515 C2C2-Gata Transcription Factor Family AT4G17570 51.498 4.67e-149 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pvu2g0015 ASXH 1.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0015 - - gmx:100798504 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0015 2 110266 116534 Pvu3g2311 3 44382105 44388060 PCT