LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu2g0002	ATGGCTTCCTTTACCCTCCTTATACCAACACTTATCTCTCTTCAATTTTATCTTCTTTCCTTAGCTTTTGCAAACGTTAATATTGATTCCACACTTTCCACCGCAGACAATGGTGTGTGGCGTTCACCTTCCGCTCATTTTGCCTTTGGGTTTCGCCCATTCAATAATGATACAGATCCCAAAACCAAGCTCTTCATGGTTGCCATATGGTACGACATGATACCCGACAAGACCGTTGTTTGGAGTGCAAAAACAGACAACAAACTTGCGACAGCACCAACGGGATCACAGGTTCGGATCACATCAGCGGGGCTAACTCTAGCAGGTCCCAAAGGAGATTCCATATGGACATCAAACTTGGAAGGTATAATTGTCTCCGTAGGATCTATGCTTGATACTGGCAACTTTGTTCTACTCAATCAGAACTCTGAAAAGTTGTGGCAAAGTTTTGAGAACCCCACAGACACCTTGTTGCCTAATCAATCTCTCCAACCCGGAGGCACGCTAACTTCTCGATTGACAGACACCAATTACTCAAGTGGAAGGTTCCAACTTTATTTCGAGGATGGTAATGTGTTACTGAGTACTCTTGCATGGCCTTCTCCACTGAAATACAACTCGTATTATGTGCTGGATGCCTCTGGTGCTGCTTCAACATTAGTGTTCAATGAGTCTGGGGATATCTATGCAAAGACCACAAATGGGACTACAATCCAACCTCAAGGTTCGCAATGGAATAGCACGGATCTCGATCCTGAGGTGAATTACTACAGAGCAACGCTTGACTTCAGTGGAGTTTTCACGCAGTATTATCATCCACGGAACAGCACTGCTCAACCAGGGTGGAAAATCATGAGGTATGTTCCTGACAACATTTGCAATGAAATATTTTATCAGTATGGTAGCGGTTCCTGTGGCTATAATAGCTACTGCTCCATGGAAAAAAATAGGCCTACCTGCAAATGTCCTTATGGGTATTCGCTGTTGGATCCAAGTAATCAATTTGGTGGATGCCAACCCAATTTCACCCTCGCTTGTGGAGCCGATGTTCAAACACCGCCAGAGGAACTATATGAAATGCATGCCGCTCGAGATTTTAATTTTCCTTTGGGGGATTATGAAAGGATACAACCTTACTCTAGACAGGACTGCCGGCAATTTTGCTTGCAGGATTGCATGTGTGCTATGGCCATTTCAGGAGGCGACACTTGTTGGCTGAAGAGATTTCCCCTTGGTAACGGTAGACAACAACCAATCAGTGATCAACATTTTGTCTATATCAAAACAAGAGTTATTCGCAACTTTTATCCAGGTGCAAACATGGAACTTCCCCTGTCTCCGGATTCAAAGAAAGAATATAAAGCTAAGTTGTTTCTTTTGGGACCACTTATTGGTTCTCTTGTCCTTAACAGTATTCTCCTAGCTACAGTTGCTTTGTTTTTTCTCATGAAGCCAAAAGTGAAAAGAGTTCCCATAACTTCTTCTAGTCCTTTGGAAACAAATTTGCATTCGTTTACTTATGAAACATTGGAAAAGGCCACATGGAATTTTAAGGAGGAAATAGGCAGAGGTTCTTATGGCATTGTTTACAAAGGGCAACTAGAAGCAGGTTCTTGTCATCTGGTTGCTGTGAAGAGATTGGACAGATTGGCACAAGAACGAGAGAAGGAATTTAGGACTGAATTGAGTTCCATTGGTAGAACCTGTCACAAAAATCTGGTCAGGTTGATTGGATTTTGTGACGAGGGAATGAATAGAATATTGGTGTATGAGTTCATGAGCAATGGTACTCTTGCAGACATCCTGTTTGGACAATCCAACCCCAAATGGAATGTAAGGGTTGGATTTGCTCTGGGGATTGCAAGAGGGTTGGTGTACTTGCACGAAGAGTGTGACACTCCCATTATTCATTGTGATATAAAACCTCAAAATATACTGATAGATGAGTATTTGAATCCAAAGATATCTGACTTTGGGCTGGCCAAGTTGTTGTTGTCTGACCAAAGTAGAACCACCACTATGATCCGAGGAACTCGAGGATATGTGGCTCCTGAATGGTTCAAGAATGTTGCTGTGACGGTTAAAGTGGATGTTTACAGCTTTGGGGTAATGTTGTTGGAAATAATTTGCAGCAGAAGAAGTGTGTTGATGATGGAGTCAGGGGAAGAAGAGAAGGCATTGCTGACAGATTGGGCTTGTGATTGCTTTATGGAAGGGAAAATAGATGTTCTGGTGGAGAACGATGAAGAGGCCTTATCTGACTATGTGAGGCTACAAAAATGGGTAAAAATAGCAATATGGTGCATTCATGAGCAACCTGAAATGAGACCAACAATGGGGATGGTCATGCAAATGCTAGAAGGCTTTGTTGAAGTCCCTAACCCACCATCTCCTTTCTCATACGTTCCATGCCTTAACTAA	2421	0.4263	MASFTLLIPTLISLQFYLLSLAFANVNIDSTLSTADNGVWRSPSAHFAFGFRPFNNDTDPKTKLFMVAIWYDMIPDKTVVWSAKTDNKLATAPTGSQVRITSAGLTLAGPKGDSIWTSNLEGIIVSVGSMLDTGNFVLLNQNSEKLWQSFENPTDTLLPNQSLQPGGTLTSRLTDTNYSSGRFQLYFEDGNVLLSTLAWPSPLKYNSYYVLDASGAASTLVFNESGDIYAKTTNGTTIQPQGSQWNSTDLDPEVNYYRATLDFSGVFTQYYHPRNSTAQPGWKIMRYVPDNICNEIFYQYGSGSCGYNSYCSMEKNRPTCKCPYGYSLLDPSNQFGGCQPNFTLACGADVQTPPEELYEMHAARDFNFPLGDYERIQPYSRQDCRQFCLQDCMCAMAISGGDTCWLKRFPLGNGRQQPISDQHFVYIKTRVIRNFYPGANMELPLSPDSKKEYKAKLFLLGPLIGSLVLNSILLATVALFFLMKPKVKRVPITSSSPLETNLHSFTYETLEKATWNFKEEIGRGSYGIVYKGQLEAGSCHLVAVKRLDRLAQEREKEFRTELSSIGRTCHKNLVRLIGFCDEGMNRILVYEFMSNGTLADILFGQSNPKWNVRVGFALGIARGLVYLHEECDTPIIHCDIKPQNILIDEYLNPKISDFGLAKLLLSDQSRTTTMIRGTRGYVAPEWFKNVAVTVKVDVYSFGVMLLEIICSRRSVLMMESGEEEKALLTDWACDCFMEGKIDVLVENDEEALSDYVRLQKWVKIAIWCIHEQPEMRPTMGMVMQMLEGFVEVPNPPSPFSYVPCLN*	807

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu2g0002	806	PANTHER	MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN	16	801	-	-
	Pvu2g0002	806	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	635	647	IPR008271	GO:0004672\|GO:0006468
	Pvu2g0002	806	Pfam	Protein kinase domain	516	784	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu2g0002	806	Gene3D	Transferase(Phosphotransferase) domain 1	593	791	-	-
	Pvu2g0002	806	PIRSF	SRK	1	805	IPR024171	GO:0004674
	Pvu2g0002	806	SUPERFAMILY	Protein kinase-like (PK-like)	493	787	IPR011009	-
	Pvu2g0002	806	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	16	801	-	-
	Pvu2g0002	806	SMART	blect_4	31	153	IPR001480	-
	Pvu2g0002	806	Gene3D	Phosphorylase Kinase; domain 1	481	592	-	-
	Pvu2g0002	806	Gene3D	-	152	279	IPR036426	-
	Pvu2g0002	806	SUPERFAMILY	alpha-D-mannose-specific plant lectins	79	172	IPR036426	-
	Pvu2g0002	806	Gene3D	-	23	151	IPR036426	-
	Pvu2g0002	806	ProSitePatterns	Protein kinases ATP-binding region signature.	521	545	IPR017441	GO:0005524
	Pvu2g0002	806	ProSiteProfiles	Protein kinase domain profile.	515	790	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu2g0002	806	ProSiteProfiles	Bulb-type lectin domain profile.	30	151	IPR001480	-
	Pvu2g0002	806	SMART	serkin_6	515	790	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pvu2g0002	806	CDD	STKc_IRAK	521	789	-	-
	Pvu2g0002	806	Pfam	D-mannose binding lectin	78	164	IPR001480	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu2g0002	Pvu-Chr2	10859	15128	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu2g0002	501	788	Receptor kinase-like Gene Family	AT1G60800	43.390	1.21e-68	235

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Pvu2g0002		Pkinase	4.2e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu2g0002	-		-	vra:106755039	1250.34