Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2772 ATGGAAAAGATAGAGAGAGAGGGAGTGTCGGTGGAAGAGGAAGAGGAAGAAGAAGCGGAAGCCTCAGTGGAGATATGGAAGTACATATTTGGATTTGTGGAAATGGCAGTGGTGAAATGTGCGATAGAGCTTGGGATAGCTGAAGCCATAGAAAAGCATGGAAGGCCGATGACACTGTCGGAGATATCATCAGCTATAGGCTGTGATCCTTCTCTTCTCAAGCGCATAATGAGGTTCCTCGTGCGCAGAAAGATATTCAAACCCGTCACCAATGGCTATTCACAGACACCTCTCTCTCGCCGTTTCATCAGAGAAGGAAAACAGAGCATGGCCGCTTTACTTCTGCTCGAGAGCAGTCCTGTGATGCTCGCGCCATGGCACAGTCTAAGCGCTCGCGTCATGGCCAACGGCCGTCCATCATTTCAGAACACTCACGGCGAAGACGTGTGGCGCTTTGCCGCCGCAAATCTTGACCACAGCAACCTCATCAACGAAGGGATGGCATGCGATACTAAGCTTGTTATTCCTGTGATCATCCGAAGCTGTAGCGAGGCGTTTGATGGCGTGGAGTCCGTGGTGGACGTGGGTGGGGGCAACGGCAGCGCCATGCGCATCCTCCTTGAGGCTCTCCCTTCCATTCGAGCCATGAATTTCGATCTTCCCCATGTGATTGCCCAGGCCCCTCCCTGCGATGGCCTCCAACACGTGGCAGGCAACATGTTCGAGAGTGTTCCTGAAGCCGACGCTGTTTTTCTCAAGTGGGTTTTGCACGACTGGTCGGACGAAGAGTGCATCGAAATCTTGAAGAAGTGCAGGGAAGGAGTGTCGAAGGAGAAGGGGAGGGTGGTGATCGTGGAGGCGGTGATTGAAGAAGAAGAAGAAGGTAGCAAGCTGGCTGACGTAGGAGTTGTTCTTGACATGGTTATGATGGCTCACACTAACTTTGGGAAAGAGCGGACTCTGAAAGAGTGGGAATATGTTATCAAAACGGCAGGGTTTAGCTCATTCACCGTCAAACCAATTCACGCTGTGCAGTCTGTTATTTTGACTTTCTACTGA 1059 0.5137 MEKIEREGVSVEEEEEEEAEASVEIWKYIFGFVEMAVVKCAIELGIAEAIEKHGRPMTLSEISSAIGCDPSLLKRIMRFLVRRKIFKPVTNGYSQTPLSRRFIREGKQSMAALLLLESSPVMLAPWHSLSARVMANGRPSFQNTHGEDVWRFAAANLDHSNLINEGMACDTKLVIPVIIRSCSEAFDGVESVVDVGGGNGSAMRILLEALPSIRAMNFDLPHVIAQAPPCDGLQHVAGNMFESVPEADAVFLKWVLHDWSDEECIEILKKCREGVSKEKGRVVIVEAVIEEEEEGSKLADVGVVLDMVMMAHTNFGKERTLKEWEYVIKTAGFSSFTVKPIHAVQSVILTFY* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2772 352 PIRSF O-mtase 3 352 IPR016461 GO:0008168
Pvu1g2772 352 Gene3D - 9 101 IPR036388 -
Pvu1g2772 352 SUPERFAMILY "Winged helix" DNA-binding domain 15 105 IPR036390 -
Pvu1g2772 352 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 352 IPR016461 GO:0008168
Pvu1g2772 352 PANTHER O-METHYLTRANSFERASE 11 347 IPR016461 GO:0008168
Pvu1g2772 352 Pfam Dimerisation domain 37 81 IPR012967 GO:0046983
Pvu1g2772 352 Pfam O-methyltransferase domain 126 334 IPR001077 GO:0008171
Pvu1g2772 352 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 11 347 - -
Pvu1g2772 352 Gene3D Vaccinia Virus protein VP39 104 350 IPR029063 -
Pvu1g2772 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 107 348 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2772 Pvu-Chr1 52034776 52036089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2772 38 338 Monolignol Biosynthesis Gene Families AT5G54160 34.286 5.95e-63 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2772 K22588 - gmx:100782951 501.516