Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2756 ATGGCGTTTTATAATAAGGTTGGAAATGTTTTGAGGCAGGGTGCCGCTCGCAGCACACAAGCACCTGTTTCATCCATGCTTAATTATATTCGCTGCATGTCTTCAAGCAAGCTTTTCGTTGGAGGCCTTTCGTACGGAGTTGATGACCAGTCTCTTAGGGACGCATTTGCTGGCTATGGAGACGTGGTTGAGGCAAGGGTTATAACTGACAGAGACACTGGAAGATCAAGGGGATTTGGATTTGTCAACTTCTCCAGTGACGAGTCTGCAACCTCGGCACTCTCTGCCATGGATGGGCAGGATCTAAATGGGCGAAACATTAGGGTGTCATATGCAAACGATAGACCTTCTGGGCCACGATCTGGTGGCGGTGGTGGTTATTCTTCTCGTAATGATGGTGGTTGGTGA 408 0.4853 MAFYNKVGNVLRQGAARSTQAPVSSMLNYIRCMSSSKLFVGGLSYGVDDQSLRDAFAGYGDVVEARVITDRDTGRSRGFGFVNFSSDESATSALSAMDGQDLNGRNIRVSYANDRPSGPRSGGGGGYSSRNDGGW* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2756 135 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Pvu1g2756 135 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 108 IPR000504 GO:0003723
Pvu1g2756 135 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL 1 134 - -
Pvu1g2756 135 SUPERFAMILY RNA-binding domain, RBD 30 133 IPR035979 GO:0003676
Pvu1g2756 135 MobiDBLite consensus disorder prediction 109 135 - -
Pvu1g2756 135 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 134 - -
Pvu1g2756 135 Gene3D - 20 135 IPR012677 -
Pvu1g2756 135 SMART rrm1_1 37 110 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2756 Pvu-Chr1 51956009 51958022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2756 16 124 Eukaryotic Initiation Factors Gene Family AT4G34110 39.450 2.92e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2756 - - gmx:100527220 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2756 1 51956009 51958022 Pvu1g2756 1 51956009 51958022 ECH