Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2740 ATGGCCACTTCCAAACTAAAACGGAAAACCCTACATTCTCTCTGTAACCTCTTTCTTCTCTTTTTCACTCTCGCCGGCACCGCCATTGCCGACGATGCCGCCGTCATGTCCAAGCTCAAGGAAGCCTTGAGTCCCACGCCGTCGGGCTGGTCGGGGACCAGCTTCTGTGACTGGAAAGGCGTCGGATGCAGGGGCAACAGCGTAACCTCAATCAACATCGCTTCACAGTCACTCACCGGAACGCTACCTCTGGATCTCAACTCCCTCTCCCAGCTCACCTCGCTCTCTCTCCAGAGCAACGCGCTCGCCGGCGCGTTGCCTTCCCTCGCCAACCTCTCCATGCTGCAAACCGTCTTCCTCGGCGGCAACAACTTCACCTCCATCCCCAAGGGTTGCTTCCAGGGTCTTACTAGCTTACAAACCCTCAGCATCGAAGACTGCTTCAACCTCGCTCCATGGTCGATTCCCACCGAGTTGACTCAGTCCTCCAACCTCGTCAAACTCGATCTCGGAAGCACAAACCTCATTGGTACCTTGCCGGATGTGTTTGACTCCTTTGTGAGTTTGCAGGAGCTTCGTCTCTCTTACAACAACCTCACTGGGGGTTTGCCGAAGAGCTTCGCGGGATCTGGGATTCAGTATCTGTGGCTCAACAATCAGAAAGACGGGTTCGGGTTTTCGGGTACTATTGAGGTGCTTGCTTCCATGACCCATTTGACTCAGGTGTGGCTTCAGAAGAACCTTTTCACAGGTCCCATTCCGGATTTGTCGAATTGCACCACTTTGTTTGATCTGCAGCTGAGAGACAACCAGTTAACCGGTGTGGTTCCGCCTTCTCTCATGTCCCTTTCTAGCTTGCAGAACGTTTCTTTAGACAACAATGTGCTTCAGGGTCCTTTTCCTTCGTTTGGGAAAGGTGTGAAGGTAACTCTCGATGGGGTGAATAGTTTTTGTACGAAAGACACTGGACCCTCTGGACCCTGCGATTCTCGCGTCACCACTTTGCTTGATATTGCTAAAGATTTCGGCTATCCCATTAAGTTGGCGCGTTCCTGGTCCGGGAATGATCCTTGTGCCGATTGGAGTTTCGTTGTGTGTGCTGCGGGGAAGATTGTTACGGTGAATTTGGCGAAGCAGAATTTGACGGGAACGATTTCACCTGCATTTGCCAATTTAACTGATTTGAGAAACTTGTATCTCAATAGCAATAATTTGGTGGGTTCAATACCGGGAGGCCTGACGAATTTGGCTCAGCTTGAGGTTCTGGATGTGTCTAATAACGATCTATCTGGTGATGTTCCAAAGTTCCCAAGCAAGGTGAAGTTCAGTAGTGCAGGTAATGCTCGGCTTGGGCATTCTGGAGGTGGTGGTGGCAATGGAAGTACTCCGTCAAACGGTTCTGGTGGTGCACCGAGTGGAAGTCCAAGTGCAGCGTCAGGCGGTTCGGGACTCTCTCCTGCTTGGATCGGAGGTATTGTGGTTATTGCTGTGTTTTTTGTTGCGGTGGTCGTATTTGTCTTTTGCAAGTGTCATGCTAAAAATCGCCACGGGAAGTTTGGAAGGGTTAATAATCCGGAAAATGGGAAAGGAGAGGTTAAGATTGATATGATGAGCGTTACCAATTCCAATGGATATGGTGGTGTCCCGAGCGAGTTGCAAAGCCAGGGCAGTGAGCGTAGTGATATTAATGTTTTTGAGGGTGGGAATGCTACTATTTCAATTCAGGTTCTTCGGCAAGTAACGGATAATTTCAGTCAGAATAACATTTTAGGTAGGGGAGGATTCGGGGTTGTTTATAAAGGGGAATTGCATGACGGAAGTAAAATTGCTGTGAAGAGAATGGAATCTGTTGCAACGGGGAGTAAGGGATTGAATGAGTTCCAAGCAGAGATTGCAGTTCTCAGTAAAGTCAGACACAGACATTTGGTTGCTCTTTTAGGATTTTGCATCAACGGCAACGAAAGGCTTTTGGTGTACGAGTATATGCCTCAAGGGACGTTAACACAACACCTGTTTGATTGGCAAGAAAATGGATGTGCTCCATTGACTTGGAAACAAAGGGTAGCAATAGCTTTGGATGTAGCTCGGGGAGTGGAATACCTGCACAGCTTAGCTCAGCAAAGCTTCATTCATAGGGACTTGAAACCCTCCAACATATTATTGGGTGATGACATGAGAGCCAAGGTTGCAGATTTTGGTTTGGTAAAAAATGCACCAGATGGAAAATATTCTGTCGAGACAAGGTTGGCTGGAACATTTGGATATCTGGCACCTGAATATGCAGCTACTGGAAGAGTGACCACCAAAGTAGATGTGTACGCATTTGGAGTAGTTTTGATGGAACTGATCACCGGTAGAAGGGCATTGGACGATACTGTGCCTGATGAAAGGTCTCACTTGGTTTCCTGGTTCCGTAGGGTACTAATTAACAAGGAGAACATCCCAAAGGCAATTGATCAAACCCTGGATCCCGATGAGGAAACCATGGAGAGCATATATAAAGTGGCTGAACTGGCAGGTCATTGCACTGCTCGTGAACCCTACCAAAGGCCAGATATGGGTCATGCAGTGAATGTCTTGGTTCCTCTGGTAGAGCAATGGAAGCCTACCAGCCATGAAGAAGAAGAAGGTTATGGCATTGACGTTCACATGAGCCTTCCTCAAGCTCTGCAAAGATGGCAAGCTAATGAAGGCACTTCCACAATGTTTGACATGTCCACTTCACAAACTCAATCAAGCATTCCTGCAAAACCTTCAGGATTTGCAGACTCTTTTGATTCCATGGATTGCCGATGA 2796 0.4807 MATSKLKRKTLHSLCNLFLLFFTLAGTAIADDAAVMSKLKEALSPTPSGWSGTSFCDWKGVGCRGNSVTSINIASQSLTGTLPLDLNSLSQLTSLSLQSNALAGALPSLANLSMLQTVFLGGNNFTSIPKGCFQGLTSLQTLSIEDCFNLAPWSIPTELTQSSNLVKLDLGSTNLIGTLPDVFDSFVSLQELRLSYNNLTGGLPKSFAGSGIQYLWLNNQKDGFGFSGTIEVLASMTHLTQVWLQKNLFTGPIPDLSNCTTLFDLQLRDNQLTGVVPPSLMSLSSLQNVSLDNNVLQGPFPSFGKGVKVTLDGVNSFCTKDTGPSGPCDSRVTTLLDIAKDFGYPIKLARSWSGNDPCADWSFVVCAAGKIVTVNLAKQNLTGTISPAFANLTDLRNLYLNSNNLVGSIPGGLTNLAQLEVLDVSNNDLSGDVPKFPSKVKFSSAGNARLGHSGGGGGNGSTPSNGSGGAPSGSPSAASGGSGLSPAWIGGIVVIAVFFVAVVVFVFCKCHAKNRHGKFGRVNNPENGKGEVKIDMMSVTNSNGYGGVPSELQSQGSERSDINVFEGGNATISIQVLRQVTDNFSQNNILGRGGFGVVYKGELHDGSKIAVKRMESVATGSKGLNEFQAEIAVLSKVRHRHLVALLGFCINGNERLLVYEYMPQGTLTQHLFDWQENGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDTVPDERSHLVSWFRRVLINKENIPKAIDQTLDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTSHEEEEGYGIDVHMSLPQALQRWQANEGTSTMFDMSTSQTQSSIPAKPSGFADSFDSMDCR* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2740 931 CDD STKc_IRAK 590 863 - -
Pvu1g2740 931 Gene3D Ribonuclease Inhibitor 329 454 IPR032675 -
Pvu1g2740 931 Gene3D Ribonuclease Inhibitor 30 323 IPR032675 -
Pvu1g2740 931 SMART LRR_typ_2 186 209 IPR003591 -
Pvu1g2740 931 SMART LRR_typ_2 392 416 IPR003591 -
Pvu1g2740 931 SMART LRR_typ_2 89 111 IPR003591 -
Pvu1g2740 931 SMART LRR_typ_2 112 135 IPR003591 -
Pvu1g2740 931 Pfam Leucine Rich Repeat 188 208 IPR001611 GO:0005515
Pvu1g2740 931 ProSitePatterns Protein kinases ATP-binding region signature. 590 612 IPR017441 GO:0005524
Pvu1g2740 931 SUPERFAMILY L domain-like 43 436 - -
Pvu1g2740 931 MobiDBLite consensus disorder prediction 457 480 - -
Pvu1g2740 931 Pfam Leucine rich repeat N-terminal domain 332 366 IPR013210 -
Pvu1g2740 931 Pfam Leucine rich repeat N-terminal domain 30 63 IPR013210 -
Pvu1g2740 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 709 721 IPR008271 GO:0004672|GO:0006468
Pvu1g2740 931 PANTHER OSJNBA0070M12.3 PROTEIN 13 931 - -
Pvu1g2740 931 Pfam Leucine rich repeat 90 146 IPR001611 GO:0005515
Pvu1g2740 931 Pfam Leucine rich repeat 373 429 IPR001611 GO:0005515
Pvu1g2740 931 Gene3D Phosphorylase Kinase; domain 1 547 661 - -
Pvu1g2740 931 Pfam Protein tyrosine and serine/threonine kinase 587 858 IPR001245 GO:0004672|GO:0006468
Pvu1g2740 931 MobiDBLite consensus disorder prediction 451 480 - -
Pvu1g2740 931 Gene3D Transferase(Phosphotransferase) domain 1 662 884 - -
Pvu1g2740 931 MobiDBLite consensus disorder prediction 904 918 - -
Pvu1g2740 931 SUPERFAMILY Protein kinase-like (PK-like) 562 860 IPR011009 -
Pvu1g2740 931 MobiDBLite consensus disorder prediction 904 931 - -
Pvu1g2740 931 SMART serkin_6 584 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2740 931 ProSiteProfiles Protein kinase domain profile. 584 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2740 931 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 13 931 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2740 Pvu-Chr1 51861744 51865513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2740 68 860 Receptor kinase-like Gene Family AT5G07280 32.479 4.50e-98 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pvu1g2740 PK_Tyr_Ser-Thr 9.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2740 - - gmx:100781851 1533.85