Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2719 ATGTTGAAATCCATAGGCAAAAGCTTGATGAGGGTTCAACAGAAGTGTGTGAAGAAGCAAAAGAGTGATGAAGTTGATAAGAGTGTGTCAGTGCATGGTGATGAAGATGAAGACGTGGTTGTTTTGGCTGTGCAGTGTTGCAATTGTTCCACAGAGGAAAACAAACAATGCAACTGTGACCATATTCATGCTGCAGATGACCAAAATCATGCTAATTCCAACAGTTCCTTTACTCATTCTGTCATCAACATGGTGGGGATGCTCATAGGTCTGGGGCAACTATCAACTCCATATGCTATAGTAAGTGGAGGGTGGGTGTCTGCATTCTTGCTTATAGGACTAGGAGTGATGTGTGCTTATAGCTCTCACATACTTGGAACATGCCTCAGAAAGAATCCAAAGTTAAGAAGCTTTGTGGATATTGGGAAGCATGCATTTGGATCAAAAGGGAGGTTGGTGGCTGCAACAATCATCTACATGGAAGTCTTCATGGCCCTTGTTTCCTACACAATCTCATTGCATGATAATTTGACCAGAGTGTTTATGGGGACAAGTTTGAAGCACCACTTCCCCAAATTCTCTTCATCTCAGCTCCTAACTGTGGTGGCAGTCCTCATTTGCCTCCCTAGTTTGTGGATCAGAGACCTTTCTTCCATATCCTTCCTTTCAACTCTTGGTATTCTCATGTCCCTTCTCATTTTTGTGTGTGTAGCAGCCACTGCACTTTTAGGACACATCCCCTCCAATCATGCTATACCTGTCCTCCAACTGCATAATATTCCATCAGTATCTGGCCTTTATGTCTTTGGCTATGGAGGACACATTGTTTTCCCCGAGTTATATACATCCATGAAAGACCCCTCCAAATTTACCAAGGTTTCTATTGTGAGCTTCGCAGTGGTTACAGGAATTTACACGACATTGGGGTTCATGGGTGCAAGGATGTTTGGTAAGGATGTGAAGTCTCAAATAACTCTGAGCATGCCACCAGAGAAGATTGTGACAAAGATTGCTCTGTGGGCAACAGTGGTGGCACCAATGACCAAATATGCACTTGAATTCACACCTTTGGCAATTCAACTAGAACATGCACTTCCAAGTACAATGAGTTGCAGAACCAAAATGATTATTAGGGGTTGCGTCGGTTCATTTTCACTTTTGGTCATTCTATCTCTTGCTCTCTCGGTTCCTTATTTTGAACATGTACTAAGTCTCACTGGTTCCCTTGTTAGTGTTGCCGTTTGTTTAATTCTCCCATGTTCTTTCTACCTCAAGATATGTTGGGCTCAAATGTCATACCCTCTCTTGCTCCTAAACCTTTTTCTCATCATATTTGGCTTTCTTCTTGCTCTCATTGGCACCATTTCCTCCTCAAGCTTCCTACTCAAAACTTTTCAATTGCATCACTCAACTTCACCAACTTAA 1425 0.4239 MLKSIGKSLMRVQQKCVKKQKSDEVDKSVSVHGDEDEDVVVLAVQCCNCSTEENKQCNCDHIHAADDQNHANSNSSFTHSVINMVGMLIGLGQLSTPYAIVSGGWVSAFLLIGLGVMCAYSSHILGTCLRKNPKLRSFVDIGKHAFGSKGRLVAATIIYMEVFMALVSYTISLHDNLTRVFMGTSLKHHFPKFSSSQLLTVVAVLICLPSLWIRDLSSISFLSTLGILMSLLIFVCVAATALLGHIPSNHAIPVLQLHNIPSVSGLYVFGYGGHIVFPELYTSMKDPSKFTKVSIVSFAVVTGIYTTLGFMGARMFGKDVKSQITLSMPPEKIVTKIALWATVVAPMTKYALEFTPLAIQLEHALPSTMSCRTKMIIRGCVGSFSLLVILSLALSVPYFEHVLSLTGSLVSVAVCLILPCSFYLKICWAQMSYPLLLLNLFLIIFGFLLALIGTISSSSFLLKTFQLHHSTSPT* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2719 474 PANTHER AMINO ACID TRANSPORTER AVT1H 25 467 - -
Pvu1g2719 474 PANTHER OS05G0424000 PROTEIN-RELATED 25 467 - -
Pvu1g2719 474 Pfam Transmembrane amino acid transporter protein 74 456 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2719 Pvu-Chr1 51747839 51750976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2719 46 469 Amino Acid or Auxin Permease AAAP Family AT5G16740 60.656 6.81e-172 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2719 - - gmx:100790897 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2719 1 51747839 51750976 Pvu1g2719 1 51747839 51750976 ECH