Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2696 ATGGCGGAGGAAGAAGAGAATGGAGCGTCGATTCAACTCGAATTCCCGAAGGGTCGGGTTAAGAAGATTATGGTGCTGGACGAGGATGTGAAGAGAGTGAGTTCCGAAGCGTTGTTCCTCGTGTCGCGCTCCACGGAGTTGTTCCTCCAATTTCTGGCTGAAAAATCTGCGAACGTTGCCATTGAAAAGAAACGGAAGACTGTGAATCTGGAACACGTGAGAATTGCCGTTCAGAGGCACCAGCCCACCAGGGATTTTCTCCTCGATGATCTTCCGCCGCCGTCTCGGCCCGCCAAGCTCGGTGAGCCCACTCAGCCCGTGTCTCGGCCCAAACTTGATGCCCCTCCTCCTGGTACTCGTCGCATCGATCAATTCTTCCGAAAGCCAGAGCCTCAAAACCTTGCCAAGGCTCAATCGACTGAAAATCCAGCCCAAGCCCAAGCCCAACCGCCTGAAATTCCTGCCCAAGCTCAATCGCCCGAAATTCCTGCTCAAGCTCAACCGCCCGAAGTTGCTGCTCAAGCTCAGTCGCCTGAAATTGTTGCTCAAGCTCTGTCGCCGGAAATTCCTGCTCAAGCTCAGTCGCCAGTACCCGTAGATGAGTAA 606 0.5413 MAEEEENGASIQLEFPKGRVKKIMVLDEDVKRVSSEALFLVSRSTELFLQFLAEKSANVAIEKKRKTVNLEHVRIAVQRHQPTRDFLLDDLPPPSRPAKLGEPTQPVSRPKLDAPPPGTRRIDQFFRKPEPQNLAKAQSTENPAQAQAQPPEIPAQAQSPEIPAQAQPPEVAAQAQSPEIVAQALSPEIPAQAQSPVPVDE* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2696 201 MobiDBLite consensus disorder prediction 84 201 - -
Pvu1g2696 201 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 77 IPR003958 -
Pvu1g2696 201 SUPERFAMILY Histone-fold 11 92 IPR009072 GO:0046982
Pvu1g2696 201 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 3 130 - -
Pvu1g2696 201 Gene3D Histone, subunit A 1 92 IPR009072 GO:0046982
Pvu1g2696 201 MobiDBLite consensus disorder prediction 133 154 - -
Pvu1g2696 201 PANTHER NUCLEAR FACTOR Y, SUBUNIT C13 3 130 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2696 4 128 CCAAT-HAP5 Transcription Factor Family AT5G43250 65.600 2.52e-50 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pvu1g2696 CBFD_NFYB_HMF 1.5e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2696 - - vun:114164970 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2696 1 51607265 51607870 Pvu1g2696 1 51607265 51607870 ECH