Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2670 ATGTACCTGTCGGAGAAGCCGCGCCCAATCGACTTCTACAAGGAGGAAGGCGCGCGCGACATGATGATCGAGGTCGTCTCCAACGGCGACCTCGCGCCGCCGCCGCCGCACCACCCTCCGCCGATGATCCTCGGCGAGAGCAGCGGAGAGGACCCCGAGGTGGAGATCAAAGCCCCCAAGAAGCGGGCGGAGACGTGGGTGCAGGACGAGACGCGCTCGCTCATTGGCCTCCGCCGCGAGATGGACGCGCTCTTCAACACTTCCAAGTCCAACAAGCACCTCTGGGAGCAGATATCCGCCAAGATGAGGGAGAAGGGTTTCGATCGGTCTCCCACCATGTGCACCGATAAGTGGCGCAACCTACTCAAGGAGTTCAAGAAGGCCAAGCACCAGGACCGTGGAGGGAGCGGCTCTGCCAAGATGTCGTATTACAAGGAGATTGATGAGATCCTCAGAGAGAGGAGCAAGAATGTGCAGTACAAGAGCCCCACTCCTCCGCCGAAGGTTGATTCTTTCATGCAGTTTGCTGATAAAGGTATTGATGATACTAGCATCTCTTTTGGACCTGTAGAAGCTACTGGAAGACCAACACTCAATCTTGAGAGAAGTTTGGATCATGATGGACATCCTCTTGCCATTACCACAGCTGATGCTGTTGCAGCTAGTGGAGTCCCTCCTTGGAATTGGAGAGAGACTTCTGGAAATGGTGGAGAAAGTCAGTCATGTTGTGGAAGGGTTATATCAGTTAAATGGGGTGATTATACAAGACGAATAGGTATTGACGGCACTCCAGAAGCCATCAAAGAGGCAATCAGGGCTGCTTTTAGGTTGAGAACTAAGCGCACATTTTGGTTGGAGGATGAAGACCAGATCATCCGAAGTATTGACCGTGAAATGCCTATAGGAAGTTACACTCTTCACCTGGATGAAGGAATGGCCATTAAATTATGTCTGTATGATGAGTCCGAGCATCTTCCTGTGCATACTGAAGACAAGGTATTTTACACTGAAAATGATTACCGTGATTTTCTGACCCGCCGGGGTTGGGTATGTTTAAGAGAATTTGACGGATATAGAAATATTGACAACTTGGATGATCTTCGACCTGGTGCCATATATCGTGGTGTGAGTTGA 1134 0.5079 MYLSEKPRPIDFYKEEGARDMMIEVVSNGDLAPPPPHHPPPMILGESSGEDPEVEIKAPKKRAETWVQDETRSLIGLRREMDALFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGGSGSAKMSYYKEIDEILRERSKNVQYKSPTPPPKVDSFMQFADKGIDDTSISFGPVEATGRPTLNLERSLDHDGHPLAITTADAVAASGVPPWNWRETSGNGGESQSCCGRVISVKWGDYTRRIGIDGTPEAIKEAIRAAFRLRTKRTFWLEDEDQIIRSIDREMPIGSYTLHLDEGMAIKLCLYDESEHLPVHTEDKVFYTENDYRDFLTRRGWVCLREFDGYRNIDNLDDLRPGAIYRGVS* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2670 377 CDD GT1 64 129 - -
Pvu1g2670 377 PANTHER - 5 376 - -
Pvu1g2670 377 MobiDBLite consensus disorder prediction 27 51 - -
Pvu1g2670 377 Gene3D - 66 128 - -
Pvu1g2670 377 ProSiteProfiles Myb-like domain profile. 58 122 IPR001005 -
Pvu1g2670 377 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 376 - -
Pvu1g2670 377 SMART sant 62 124 IPR001005 -
Pvu1g2670 377 Pfam Myb/SANT-like DNA-binding domain 65 150 IPR044822 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2670 20 376 Trihelix Transcription Factor Family AT3G25990 69.672 0.0 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu1g2670 Myb_DNA-bind_4 1.9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2670 - - ccaj:109807736 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2670 1 51440567 51444783 Pvu1g2670 1 51440567 51444783 ECH