Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2653 ATGGCAGCTCTGTTACCTTACGCGCCCAACATAGTCTCTGCTCCGTTCGGGAGCCGGACCGCCACGCGCCTCCCCAACCGTCCTCACTCCCACGCTTTCGCCGCTTCCACCAGACACTTTCTTCGCGGTTCTCTCTCCGTCGCCCGGTTCGGCCTCAAACCCGGTTTCTTGCCCGAGCCGGAGGACGCTGAAGGCTTGCTCAGAGAGCTGTTTGGCCGAGCGGAGGGACTTCTTTACACGATTGCGGACGCCGCCGTTTCTTCTTCCGACACGGTTGCGGCTTCCGCCGCCGCCAAACAGAACAACGACTGGCTTTCCGGAATAACCAATTACATGGAGACGGTTCTCAAGGTACTCAAGGATGGGCTTTCTACTTTGCATGTCCCATATGCTTATGGTTTTGCAATTATACTGCTCACAGTTCTTGTAAAAGCTGCCACTTTTCCTCTAACCAAAAAACAGGTAGAGTCCTCCTTAGCTATGCGAACTTTGCAACCTCAAATAAAGGCTATCCAGGAGCGGTATGCTGGCGATCCGGAGAGAATTCAACTTGAAACTGCTAGATTGTATAAACTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCTACACTCGCAACAATACCAGTGTGGATTGGGCTATATCGAGCCCTTTCAAATGTAGCAGATGAGGGACTCCTTACTGAAGGCTTCTTTTGGATACCTTCTCTTGCTGGTCCAACTTCAATCGCAGCTCGTCAAGATGGCAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCTCCCTCCCCTTGGATGGTCAGATACATTGGCTTACCTTGTCTTACCGGTGTTGCTGGTCGTCTCTCAGTACATATCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAAAGTTCTCAAGTCTTGACCAAGTTCCTTCCATTAATGATTGGTTACTTTTCTCTCTCAGTTCCTTCTGGTCTTAGCCTTTACTGGTTAACAAATAATATATTGAGCACTGCACAACAAGTATGGCTTCAAAAGTTAGGAGGTGCCAAAAATCCTGTGAGGCAAGTCCCAGATGATATCACGGAGAATGATCTAACCCAGGTTCAGAAGTCAATATCTAAACTAAATTCCACAATACCGAAAGAAGCCAAACAAAGTGAGAAAACATCTGAGGGGCCACGAGCTGGTGATAGATTTAAGCAATTAAAGGAGCAAGAGGCAAGGAGAAGACAACAAAGAGAAGAAGAAAAAAGTAAAGGCATGGAAACAGAAGCTAGAGAAACTAAAGTAGATGAGAGTCACGAGACACTTAAGAAAACTGGAAGTGATTTAAGTGTTGAAAAATCTTTGTCTGTGGGTTCAGATACTGATCCCTCCATATCTGGAGTAGTAAATGGTAACGTATTAAGTACAGACTTGGAGGAAAATCAGAATTCTACATCTGCATCTGAGACAGAAAATAATGAAGGCTCTACTCATTTCAACAATGCTGAGATAAACGAGAAAAATTCAGACAAGGAACCAAGAGAAGTATTAACATCTACAACCACCACAAACAGACAACCTCCTGCAGAAGATGCAGATCGCTTGACAAAGGATTGA 1605 0.4567 MAALLPYAPNIVSAPFGSRTATRLPNRPHSHAFAASTRHFLRGSLSVARFGLKPGFLPEPEDAEGLLRELFGRAEGLLYTIADAAVSSSDTVAASAAAKQNNDWLSGITNYMETVLKVLKDGLSTLHVPYAYGFAIILLTVLVKAATFPLTKKQVESSLAMRTLQPQIKAIQERYAGDPERIQLETARLYKLANINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTSIAARQDGSGISWLFPFVDGLPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQPNDPNMKSSQVLTKFLPLMIGYFSLSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPVRQVPDDITENDLTQVQKSISKLNSTIPKEAKQSEKTSEGPRAGDRFKQLKEQEARRRQQREEEKSKGMETEARETKVDESHETLKKTGSDLSVEKSLSVGSDTDPSISGVVNGNVLSTDLEENQNSTSASETENNEGSTHFNNAEINEKNSDKEPREVLTSTTTTNRQPPAEDADRLTKD* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2653 534 Pfam 60Kd inner membrane protein 132 346 IPR001708 GO:0016021|GO:0032977
Pvu1g2653 534 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 132 346 IPR028055 -
Pvu1g2653 534 MobiDBLite consensus disorder prediction 511 525 - -
Pvu1g2653 534 MobiDBLite consensus disorder prediction 374 534 - -
Pvu1g2653 534 Coils Coil 400 425 - -
Pvu1g2653 534 MobiDBLite consensus disorder prediction 385 443 - -
Pvu1g2653 534 MobiDBLite consensus disorder prediction 444 499 - -
Pvu1g2653 534 PANTHER OXA1 47 464 IPR001708 GO:0016021|GO:0032977
Pvu1g2653 534 PANTHER BNAA09G28180D PROTEIN 47 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2653 Pvu-Chr1 51325715 51331288 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2653 17 418 Chloroplast and Mitochondria Gene Families AT2G28800 52.580 2.86e-131 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2653 K03217 - gmx:100802546 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2653 1 51325715 51331288 Pvu1g2653 1 51325715 51331288 ECH