Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2611 ATGGATTTGGCTTCTGTTCTTTTGCTATTGACTAGTGTGTTCTCGTCGGCGTTGGCTGGGCTTGATTCACAAGATGTGCTGTATGCGCTGAAGTTATCATTGAATGCTTCTCCCAGCCAGCTTACAAACTGGAACAAAAATCTAGTTGACCCTTGTACTTGGTCCAATGTTGAATGTGACCAGAATAACAACGTTATTCGAGTTTCACTAGAATTTATGGGATTCACAGGATCATTGACACCAATAATAGCATCTCTAAAAAGTCTTGAAACTCTTTCTTTGCAAGGGAATAACATCACTGGTGACATACCAAAAGAATTTGGAAATCTTACAAGCTTGGTCAGATTGGATTTGGAAAACAACAAATTAACTGGTGAAATACCCTATTCCCTTGGTAATCTTAGAAAGCTTCAATTCTTGACATTGAGTCAAAACAATCTCAATGGAACTATTCCAGCATCACTTGCCAGTCTCCCGAACTTGCTCACTGTTTTCTCTGGAAATAATTTGAATTGTGGAGTGAGTTATCATCATCTTTGCTCATCTGATAATGCAGATCAAGGTTCGTCACATAAAACAAAAGTGGGCCTCATAGTTGGAATAGTAACGGGTTTAGTTGTTATTATTTTTCTTGGTTGTCTGCTGTTCTTCTGGTACAAAGGGTGCAAGCGTGAAATTTTTGTAGATGTTCCAGGTGAGGTTGATCGGCGAATTACATTTGGTCAAATAAAAAGATTTTCCTGGAAAGAACTACAGATAGCTACAGACAACTTCAGCGAGAAAAATATTTTAGGACAGGGAGGCTTTGGAAAGGTTTATAAAGGCATTCTAGCCGATGGTACAAAAGTTGCTGTTAAAAGGTTAACTGATTATGAGAGTCCTGCGGGTGATGCCGCTTTCCAGCGTGAAGTCGAGTTGATAAGTGTAGCTGTGCATAGGAACCTGTTACGGCTCATTGGTTTTTGTACTACTCCAACTGAACGTCTCTTAGTTTATCCCTTCATGCAAAACTTAAGTGTTGCCTATCGTCTACGAGAACTCAGACCTGGGGACCCCGTTTTGGATTGGCCTACTAGAAAACGAGTAGCTCTAGGAACAGCCCGTGGCCTAGAATATCTTCACGAGCAGTGTAATCCTAGGATTATTCATAGGGATGTGAAGGCAGCTAATATATTACTAGATGGAGATTTCGAAGCAGTTGTTGGTGACTTTGGTTTGGCAAAATTAGTTGATATTCGAAATACTACTGTGACAACTCAAGTTCGTGGGACAATGGGTCATATAGCTCCAGAATACTTGTCCACTGGAAAATCTTCAGAAAGGACTGATATTTTTGGTTATGGGATTATGCTTTTGGAACTTGTTACAGGTCAACGTGCAATTGACTTTTCACGTTTGGAAGAGGAGGATGACGTGTTATTGCTTGACCATGTTAAGAAACTGCAACGGGAGAAAAGACTAGATGTTATTGTGGACTGCAACCTGATGAAAAATTACATAATAGGAGAGGTTGAAATGATTGTACAAATTGCATTACTCTGCACACAAGGATCGCCGGAGGATCGTCCGGCGATGTCAGAAGTTGTAAGAATGTTAGAGGGAGAAGGGCTAGCTGAAAGATGGGAAGAATGGCAGCATGTGCAGGTTGCTACGAGGCAAGATTACGAGAGACTACAGAGAAGAATGAACTGGGGAGAAGATTCAATTAATAACCAAGATGCCATTGAGTTGTCAGGTGGAAGATGA 1746 0.4072 MDLASVLLLLTSVFSSALAGLDSQDVLYALKLSLNASPSQLTNWNKNLVDPCTWSNVECDQNNNVIRVSLEFMGFTGSLTPIIASLKSLETLSLQGNNITGDIPKEFGNLTSLVRLDLENNKLTGEIPYSLGNLRKLQFLTLSQNNLNGTIPASLASLPNLLTVFSGNNLNCGVSYHHLCSSDNADQGSSHKTKVGLIVGIVTGLVVIIFLGCLLFFWYKGCKREIFVDVPGEVDRRITFGQIKRFSWKELQIATDNFSEKNILGQGGFGKVYKGILADGTKVAVKRLTDYESPAGDAAFQREVELISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRELRPGDPVLDWPTRKRVALGTARGLEYLHEQCNPRIIHRDVKAANILLDGDFEAVVGDFGLAKLVDIRNTTVTTQVRGTMGHIAPEYLSTGKSSERTDIFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQREKRLDVIVDCNLMKNYIIGEVEMIVQIALLCTQGSPEDRPAMSEVVRMLEGEGLAERWEEWQHVQVATRQDYERLQRRMNWGEDSINNQDAIELSGGR* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2611 581 Gene3D Phosphorylase Kinase; domain 1 227 334 - -
Pvu1g2611 581 Pfam Leucine rich repeat N-terminal domain 25 60 IPR013210 -
Pvu1g2611 581 Pfam Protein kinase domain 259 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2611 581 SUPERFAMILY L domain-like 23 184 - -
Pvu1g2611 581 ProSiteProfiles Protein kinase domain profile. 258 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2611 581 SUPERFAMILY Protein kinase-like (PK-like) 237 533 IPR011009 -
Pvu1g2611 581 ProSitePatterns Protein kinases ATP-binding region signature. 264 286 IPR017441 GO:0005524
Pvu1g2611 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 381 393 IPR008271 GO:0004672|GO:0006468
Pvu1g2611 581 Pfam Leucine rich repeat 88 147 IPR001611 GO:0005515
Pvu1g2611 581 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 2 164 - -
Pvu1g2611 581 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 165 581 - -
Pvu1g2611 581 SMART serkin_6 258 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2611 581 Gene3D Ribonuclease Inhibitor 22 189 IPR032675 -
Pvu1g2611 581 PANTHER LRR RECEPTOR-LIKE KINASE 165 581 - -
Pvu1g2611 581 PANTHER LRR RECEPTOR-LIKE KINASE 2 164 - -
Pvu1g2611 581 Gene3D Transferase(Phosphotransferase) domain 1 335 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2611 Pvu-Chr1 51013282 51020419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2611 1 581 Receptor kinase-like Gene Family AT5G10290 68.421 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pvu1g2611 Pkinase 3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2611 - - gmx:100786654 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2611 1 51013282 51020419 Pvu2g1828 2 32942334 32951401 PCT