Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2591 ATGTGCAGGAACTCTAGTAACTCAGAGATGGTAGCTTCAAAGAAAAGCACGTTAGAGAAAAGCACGTTAGAGAAAATCACGTTAGAAGAGGTTTTGGACATTGAGAAGAACATGAGTCAGTGGGTGGTGAATCCTCCAGATCCACCCTCCATGTTGCGTCAGGTCGTGGACAACATCAAGGACATCCTCGTACCGCATCCACATCCAAACACATTCTCTTCTCTCAGGAACCAACCCTTTTCCAAACGCGCTTTTGCCTTCTTCAAGAACTTGTTTCCCATTCTTGCTTCATTCCAAAACTACAATGCCCAAAAGTTCAAGTGCGATTTCATGGCTGGCCTAATCCTCGCAATCTTCGCCATTCCTCAGTGCATGGGAAATGCAACATTGGCGCAGCTAAGTCCAGAATATGGCCTCTACACAGGAATTGTGCCACCTCTTATTTATGCTCTGCTAGCGAGTTCAAGGGAAATGGTGATTGGACCTGGATCTGTAGATTCACTGCTACTTTCCTCAATGATTCAGACATTGAAACTTCCAATTCATGATTCTATTGGATACACTCATCTTGTTTTCACTGTAACTTTTTTTGCGGGCATCTTTCAACTTGCTTTCGGCCTCTTTAGGTTTGGTTTTCTGGTGGAATATATTTCCCAATCCACGATCGTAGGGTTCTTGGCAGCAGCTGCTGTGGGCATTGGACTACAACAATTGAAAGGATTATTTGGGATCGATACCAACAAAACTGCTTTATTTTCTGTGCTCAAATCTCTTTGGACATCCTTCAAAAACCAATCATTGTGGCATCCCTACAACTTCGTTATTGGATTCTCATTTCTATGCTTCATCCTATTTACGAGATTCCTGGGTAAAAGGAACAAGAAACTTCTCTGGTTGTCACACGTTGCTCCTCTCTTATCTATTATTGCATCCTCTATTATTGCCTACAAAATAAATGTTCATGAGCACCAAGTGAAGGACTACAGAGTTGAAGTGTTGGGACCAATTAAAGGAGGAGGTAGCTTGAATCCAAGCTCTTTCAATCAGTTAATATTTGACAGCAAAGTTGTGGTTCATTTGATGAGAATAGGCTTGAACATTGCTATTATTTCATTCACGGGATCTATTGCTGTTGGACGATCATTTGCATCTCTAAAAGGACACAGTATTTATCCGAACAGAGAAGTGGTATCCTTGGGCATAATGAACATTGTTGGATCCTTAACTTCTTGCTACATTGCATCAGGGTCTTTGTCACGTAGTGCCGTAAACTACGATGCTGGGTCAGAAACAGTGGTGTCGAACATAGTGATGGCACTCACGGTGCTCTTGTCACTTAAATTTTTGACAGGGCTTTTGTATTTCACTCCCAAAGCAATGTTAGCAGCGATAATTCTTTCGGCTGTACCAGGACTCATTGACCTAAAGAAAGCACGTGAAATTTGGAAGGTCGATAAAATGGATTTCCTTGCTTGTGCTGGAGCCTTCTTCGGAGTCTTGTTTGCATCTCCGGAAATAGGCCTTGCAGTTGGGATCACGATATCATTCGCGAAGATAATTCTAACCTCAGTTCAACCAGCTATAGCGGTTATTGGAAGACTTCCAGGAACGGATTCATTCGGCGATGTTCAACAGTATCCAATGGCACTCAACATTCCTGGAGTTTTCATCGTCTCTTTAAAATCTGCATGGCTTTGTTTTGCAAATGCAAATCTTGTGGAAGAAATGATTGAGAGATGGGTGAACAATGAAAAAGGAGGAGAAAGCACCTTCCATCACGTCATCATAGATGCCTCAAGTCTTACGAACATTGACACCACGGGAATTGCTTCTCTGGTGGAGCTCAATAAAAATATGACTTCACGTGGAGTAAAGTTAGCTATCGCTAACCCTAGGTGGCATGTAATTCACAAGCTAAGATTAGCTAACTTCGTCAGCAAAATTGGAGGAAGGGTTTTCCTTTCTGTGGGAGAAGCAGTTGATGCTTGTGTTACTACTAAAATGGTTGCTGTATAA 2016 0.4211 MCRNSSNSEMVASKKSTLEKSTLEKITLEEVLDIEKNMSQWVVNPPDPPSMLRQVVDNIKDILVPHPHPNTFSSLRNQPFSKRAFAFFKNLFPILASFQNYNAQKFKCDFMAGLILAIFAIPQCMGNATLAQLSPEYGLYTGIVPPLIYALLASSREMVIGPGSVDSLLLSSMIQTLKLPIHDSIGYTHLVFTVTFFAGIFQLAFGLFRFGFLVEYISQSTIVGFLAAAAVGIGLQQLKGLFGIDTNKTALFSVLKSLWTSFKNQSLWHPYNFVIGFSFLCFILFTRFLGKRNKKLLWLSHVAPLLSIIASSIIAYKINVHEHQVKDYRVEVLGPIKGGGSLNPSSFNQLIFDSKVVVHLMRIGLNIAIISFTGSIAVGRSFASLKGHSIYPNREVVSLGIMNIVGSLTSCYIASGSLSRSAVNYDAGSETVVSNIVMALTVLLSLKFLTGLLYFTPKAMLAAIILSAVPGLIDLKKAREIWKVDKMDFLACAGAFFGVLFASPEIGLAVGITISFAKIILTSVQPAIAVIGRLPGTDSFGDVQQYPMALNIPGVFIVSLKSAWLCFANANLVEEMIERWVNNEKGGESTFHHVIIDASSLTNIDTTGIASLVELNKNMTSRGVKLAIANPRWHVIHKLRLANFVSKIGGRVFLSVGEAVDACVTTKMVAV* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2591 671 ProSiteProfiles STAS domain profile. 565 663 IPR002645 -
Pvu1g2591 671 SUPERFAMILY SpoIIaa-like 552 663 IPR036513 -
Pvu1g2591 671 Pfam STAS domain 546 659 IPR002645 -
Pvu1g2591 671 Pfam Sulfate permease family 106 493 IPR011547 GO:0016021
Pvu1g2591 671 Gene3D STAS domain 525 667 IPR036513 -
Pvu1g2591 671 CDD STAS_SulP_like_sulfate_transporter 546 654 - -
Pvu1g2591 671 PANTHER SULFATE TRANSPORTER 26 670 IPR001902 GO:0015301|GO:0016020|GO:0055085
Pvu1g2591 671 ProSitePatterns SLC26A transporters signature. 135 156 IPR018045 GO:0008271|GO:0008272
Pvu1g2591 671 TIGRFAM sulP: sulfate permease 93 656 IPR001902 GO:0015301|GO:0016020|GO:0055085
Pvu1g2591 671 PANTHER EARLY NODULIN-70 26 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2591 Pvu-Chr1 50847592 50853257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2591 35 668 Inorganic Solute Cotransporters AT5G10180 51.633 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2591 K17469 - gmx:100817841 1086.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2591 1 50847592 50853257 Pvu1g2591 1 50847592 50853257 ECH
Pvu1g2591 1 50847592 50853257 Pvu9g1454 9 20639950 20641396 ECH