Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2590 ATGGCTTCTTCAGCGATGGAAACCTGCAAATCAGAGGATTTGCACATGCAGGTGGACATTGAGAAGAACGCACAGGATGTAAGGTCTCAGTGGGTTCTTAACGCTCCTGAGCCCCCAAGTCCATGGCGTGTGGTTGCAGATTCTGTGAGGAAAACCATTTCCCACTATAAACAAAAGTTTTCCTCTCTCAGAGATCAACCCTTTACCACACTCCTCCTGTCACTTCTGCAGCTTGCTTTTCCTATTCTTGCTTGGGGCAGAAACTACACTGCTACTAAGTTCAGGAAAGATCTTCTTGCAGGCCTCACTATTGCTAGCCTCTGTATTCCACAGAGCATTGGATATGCAACCTTGGCACATCTTGCTCCTCAATATGGGCTTTATACAAGTGTGGTGCCACCACTTGTATATGCTGTGATGGGAACTTCTAGAGAGATAGCAATTGGTCCCGTGGCAGTGGTTTCTTTGCTGTTATCTTCAATGATGGAGAAATTAGTAGACCCTGCTTCTGATCCAGTGGGTTACACAAAGCTAATTCTACTTGCTACCCTCTTGGCTGGTATCTTTCAGACTTCCTTCGGACTCTTCAGGCTGGGGTTCCTTGTGGATTTCCTATCCCATGCTGCAATAGTTGGATTTGTGGCAGGAGCAGCCATTGTTATAGGGCTTCAACAGTTGAAGGGACTCTTCGGAATCACTCATTTTACGACCAAAACCGACATAGTCTCTGTCATGAAAGCTGTCTGGGAAGCATTTCATAATCCTTGGAATCCTCGAAATTTTTTCATTGGATGCTCGTTCTTGGTGTTCATCCTAACAACGAGATTTGTGGGTAAAAAGAAGAAGAAAGTGTTCTGGTTGGCATCAATTTCTCCTCTTGTATCTGTTGTTTTGTCGACTCTATTTGTGTTTTTGACAAAAGCTGATGAAAATGGAGTTAAAATTGTGAAACATGTGAAAGGAGGATTAAATCCAATCTCCATCCACCAGTTAGACTTCAGCAGCCCCTACATTGGAGAAGTGGCCAAAATTGCACTGGTTGTTGCTGTCGTTGCCCTTACCGAATCTATTGCTGTTGGGCGATCTTTTGCATCCATCAATGGATACCAACTTGATGGAAACAAGGAGATGATGTCAATAGGTTTGACAAACATCATAGGATCTTTCACCTCCTGCTACGTTGCAACTGGTTCGTTCTCTCGCACTGCTGTTAATTATGCAGCTGGGTGTGAAACTCTGGTTTCAAACATTGTGATGGCCATCACGGTGTTGGTATCGCTGCAGTTTTTGACAAAGCTCTTGTACTACACTCCTATAGCTATTCTTTCTTCTGTGATCCTATCTGCTCTCCCAGGACTTATTGACGTCAGTGAAGCTTACAAAATCTGGAAGGTTGATAAGATAGATTTTCTTGCTTGTGCTGGTGCCTTCTTCGGAGTACTGTTTGCTTCTGTGGAGATTGGTCTGCTAGTGGCGGTGGTGATATCTTTTTCAAAGATCATTCTGATCTCAATTCGACCAGGCACAGAAACTCTAGGAAAACTTCCGGGCACTAATTTGTTCTGCGATGTGTATCAGTATCCCATGGCAGTTAAGATTCCTGGAGTTATGATAATACGAGTCAAATCTGCGTTGCTTTGCTTTGCAAATGCCAATTTCGTTAGAGAAAGGATCATCAAATGGGTCTCTGAGGAAGAATCAGAAGATGACAAGGGAAATTCAAGAAGCACCATTCAACTCGTAATTCTTGACACCTCCAATTTGGTGAACATTGACACCTCTGGAATTGCTTCTCTAGAGGAACTGCATAAGAGTTTGTCTTCACAAGGAAAACAGCTAGCCATTGCGAACCCTAGGTGGCAAGTGATACACAAGCTAAAAGTGTCCAACTTTGTCGCCAAATTCGGTGGCAAAGTGTTTCTGACTGTGGAAGAAGCTCTTGGCTGCAAGAGCCTGTGCTAA 1962 0.4378 MASSAMETCKSEDLHMQVDIEKNAQDVRSQWVLNAPEPPSPWRVVADSVRKTISHYKQKFSSLRDQPFTTLLLSLLQLAFPILAWGRNYTATKFRKDLLAGLTIASLCIPQSIGYATLAHLAPQYGLYTSVVPPLVYAVMGTSREIAIGPVAVVSLLLSSMMEKLVDPASDPVGYTKLILLATLLAGIFQTSFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLFGITHFTTKTDIVSVMKAVWEAFHNPWNPRNFFIGCSFLVFILTTRFVGKKKKKVFWLASISPLVSVVLSTLFVFLTKADENGVKIVKHVKGGLNPISIHQLDFSSPYIGEVAKIALVVAVVALTESIAVGRSFASINGYQLDGNKEMMSIGLTNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMAITVLVSLQFLTKLLYYTPIAILSSVILSALPGLIDVSEAYKIWKVDKIDFLACAGAFFGVLFASVEIGLLVAVVISFSKIILISIRPGTETLGKLPGTNLFCDVYQYPMAVKIPGVMIIRVKSALLCFANANFVRERIIKWVSEEESEDDKGNSRSTIQLVILDTSNLVNIDTSGIASLEELHKSLSSQGKQLAIANPRWQVIHKLKVSNFVAKFGGKVFLTVEEALGCKSLC* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2590 653 Pfam Sulfate permease family 94 474 IPR011547 GO:0016021
Pvu1g2590 653 PANTHER SULFATE TRANSPORTER 2.1 31 649 - -
Pvu1g2590 653 CDD STAS_SulP_like_sulfate_transporter 527 641 - -
Pvu1g2590 653 Gene3D STAS domain 506 651 IPR036513 -
Pvu1g2590 653 ProSiteProfiles STAS domain profile. 546 650 IPR002645 -
Pvu1g2590 653 Pfam STAS domain 527 646 IPR002645 -
Pvu1g2590 653 SUPERFAMILY SpoIIaa-like 531 647 IPR036513 -
Pvu1g2590 653 TIGRFAM sulP: sulfate permease 81 643 IPR001902 GO:0015301|GO:0016020|GO:0055085
Pvu1g2590 653 ProSitePatterns SLC26A transporters signature. 123 144 IPR018045 GO:0008271|GO:0008272
Pvu1g2590 653 PANTHER SULFATE TRANSPORTER 31 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2590 Pvu-Chr1 50836917 50843810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2590 25 647 Inorganic Solute Cotransporters AT5G10180 68.750 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2590 K17469 - gmx:100781327 1150.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2590 1 50836917 50843810 Pvu1g2590 1 50836917 50843810 ECH