Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2570 ATGGGGAAAAGAGGGAATGTGTTGATGCAGAAGTATGAACTTGGGAAACTATTAGGGCAAGGAAACTTTGCAAAGGTTTACCATGCAAGGAACCTCAAAACTGGGGAGAGTGTTGCCGTTAAGGTGATTGAAAAGGAGAAAATTCTAAAAAATGGGTTGGAGGATCAAACGAAGCGAGAGATATCTATCATGAAACGGATTAAACACCCCAATGTTTTGCAGCTGTATGAGGTCTTGGCCACCAAGACCAAGATTTACTTCATCATAGAATATGCCAAAGGGGGTGAACTTTTCAACAAGGTGGCTAAAGGTAGATTCAGTGAGGACAGGACAAGGAAGTACATTCAACAATTGTTCAGTGCTGTTGATTTTTGCCACAGCAAGGGCGTTTATCACAGGGATTTGAAGCCAGAGAACTTGCTTTTGGATGAGAATGGTGTTCTGAAGGTAGCGGATTTTGGGTTGAGTGCGTTTGTTGAATCGCATCGACAAGACAACATGCTGCATACAGTTTGTGGAACTCCTGCATATGTGGCGCCTGAGGTTGTAAGTAGAAAGGGCTATGATGGAGCAAAATCTGATGTATGGTCTTGTGGAGTGATCTTATTTGTTCTTTTGGCTGGTCATTTGCCATTCTATGATTTGAATCTTATGTCACTGTATAGGAAAATAGGCAGGGGGGAATACAGATGTCCAAACTGGTTTTCGGTTGAAGTGCGAAGACTGTTAGCGAAAATCCTTGACCCCAACCCAGATACCAGGATATCCATGGCAAAAGTTATGGAAAGTTCGTGGTTCAGAAAAGGATTAAAACCCAGATCTGGTCAAGTGAAAAGAGAGTCTGCAAAAGTGGCATTAATTAATTCTGATCAAGTTTTTGGTTTGTGTGAGAATACAAGAGATGCTTATGTTGATGCAGATCAAGAATTGGTTGTACCTGCACATTTGAATGCTTTTGACATAATTTCTCTGTCTGCTGGGCTAGACTTGTCTGGCCTTTTTGCTAACATTGGTGAACAGGAACATATCAAATTTACATTCATGAGCTCTGCCTCATCTATCATGTCTACAGTGGAAGACATTGCTCGCATTTTGAGGATGATGATAATTAAGAAGGATGGAGGGTTGCTGAAATTGGTGAGATCCAGGGCAGGTAGAAAAGAACCGCTTTCCATTGATGTTGAAATATTTGAAGTCGCTCCATCTTTCCATTTGGTTGAGATTAAATCCAGCGGCGATACATTAGAATTCCAGAAGATATTGAGGGAAGATTTAAGACCAGCTCTCAAAGATATTGTTGGTGTTTGGCAAGATGAGCATTATCTGCAGTAG 1332 0.4122 MGKRGNVLMQKYELGKLLGQGNFAKVYHARNLKTGESVAVKVIEKEKILKNGLEDQTKREISIMKRIKHPNVLQLYEVLATKTKIYFIIEYAKGGELFNKVAKGRFSEDRTRKYIQQLFSAVDFCHSKGVYHRDLKPENLLLDENGVLKVADFGLSAFVESHRQDNMLHTVCGTPAYVAPEVVSRKGYDGAKSDVWSCGVILFVLLAGHLPFYDLNLMSLYRKIGRGEYRCPNWFSVEVRRLLAKILDPNPDTRISMAKVMESSWFRKGLKPRSGQVKRESAKVALINSDQVFGLCENTRDAYVDADQELVVPAHLNAFDIISLSAGLDLSGLFANIGEQEHIKFTFMSSASSIMSTVEDIARILRMMIIKKDGGLLKLVRSRAGRKEPLSIDVEIFEVAPSFHLVEIKSSGDTLEFQKILREDLRPALKDIVGVWQDEHYLQ* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2570 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pvu1g2570 443 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2570 443 Pfam NAF domain 313 370 IPR004041 GO:0007165
Pvu1g2570 443 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 3 440 - -
Pvu1g2570 443 PANTHER - 3 440 - -
Pvu1g2570 443 Gene3D Kinase associated domain 1, KA1 314 436 - -
Pvu1g2570 443 SUPERFAMILY Protein kinase-like (PK-like) 8 284 IPR011009 -
Pvu1g2570 443 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Pvu1g2570 443 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2570 443 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2570 443 Gene3D Transferase(Phosphotransferase) domain 1 3 313 - -
Pvu1g2570 443 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Pvu1g2570 443 CDD CIPK_C 317 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2570 Pvu-Chr1 50691048 50693609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2570 1 439 CBL-interacting serine-threonine protein kinases AT5G58380 56.858 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu1g2570 Pkinase 5.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2570 K07198 - gmx:100801834 729.554