Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2566 ATGGATTGTTGTGTGTGTACAACTATGCCACTGATCCTAAGGCCTCCGAGGAATACAATATGTGGGGCATGTTACGAAGGAGTGAGGAGCATAATCAACATGATGGGCAGTGTTGAAAGTGAGAAGGTAAAAGCAATTGTGGCCAATCCAAATCCAAACACTTCTCTACTTTCGCGAAGAAATTCGAGTAAGACACTTGAAGATTGTATAAGATGGTGTTCGGAGCAGATGGAACAGTTTAATCAACAAAAGCAAGACTTGGTTTTCCTGAGAGGCTTTGTTGCAGCCTTCAAAGAACAGATTCACACAGATATATTGGTCACTCCAGGGAGACACGGTCCACCTATACCTGCACATAAGTCCGTTTTGGCTGCGAGATCAGAAATATTTAAGAACATGCTAGAGTGCGATGAGTGCAAAGAAGCACCGAGTAAGAGCATAACTATAACGGATTTGAAGCATGAAGAACTAGAGTGTCTGCTTGAGTTTCTGTACAGTGGGAGTTTGGGTGTGGAAAAATTGGAGAAACATGTGTACGCCTTGTCACAGGCAGCGGATAAGTATATGATCCCACATTTGCTGAAACACTGCGAACGGTACCTGCTGAGTTCGCTAAGCACTTGTAATGCCCTTCAGACACTGGAGATTGCAGACACTTGTTCCAACCACACCTTGAAGGAGACAACCTTGGATTTCTTGGTCAAGAACATTGATCGTGTTGTGTCCTCACCTAAATTTGAAGCTTTTGTTCATAGGAGCCCACACCTCACTGTTCAACTCGTTACAAGGGCCTTCGCCAATGGTGCCAAATAA 813 0.4403 MDCCVCTTMPLILRPPRNTICGACYEGVRSIINMMGSVESEKVKAIVANPNPNTSLLSRRNSSKTLEDCIRWCSEQMEQFNQQKQDLVFLRGFVAAFKEQIHTDILVTPGRHGPPIPAHKSVLAARSEIFKNMLECDECKEAPSKSITITDLKHEELECLLEFLYSGSLGVEKLEKHVYALSQAADKYMIPHLLKHCERYLLSSLSTCNALQTLEIADTCSNHTLKETTLDFLVKNIDRVVSSPKFEAFVHRSPHLTVQLVTRAFANGAK* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2566 270 Pfam BTB/POZ domain 98 204 IPR000210 GO:0005515
Pvu1g2566 270 Gene3D Potassium Channel Kv1.1; Chain A 71 205 IPR011333 -
Pvu1g2566 270 SUPERFAMILY POZ domain 87 204 IPR011333 -
Pvu1g2566 270 Gene3D - 206 269 - -
Pvu1g2566 270 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 268 - -
Pvu1g2566 270 CDD BACK 206 246 - -
Pvu1g2566 270 SMART BTB_4 103 205 IPR000210 GO:0005515
Pvu1g2566 270 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 268 IPR044784 -
Pvu1g2566 270 ProSiteProfiles BTB domain profile. 103 173 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pvu1g2566 BTB 1e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2566 K10523 - gmx:100777561 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2566 1 50666604 50668175 Pvu1g2566 1 50666604 50668175 ECH