Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2563 ATGTCTCCGGCAGTCGGAGCCAGCGTCCCACTATTGGGGGAATCCAACAGAGCGATGACGCCGGCGTCCGTCTCCGGCGCGGTGTTCAACGTGGCGACGAGCATAGTCGGCGCCGGAATTATGTCAATTCCGGCAATCATGAAGGTTCTCGGAGTGGTTCCCGCTTTCGCCATGATTATCGTCGTGGCCGTGCTCGCGGAACTCTCCGTCGAGTTCCTCATGCGCTTCACGCACTCCGGCGAAACGAGGACATACGCCGGCGTCATGAGGGAAGCGTTCGGGTCGCCGGGAGCGTTGGTCGTGCAAGTTTGCGTCATCATCACCAACGTTGGGGCCTTAATTCTCTACCTTATCATCATCGGGGATGTGCTATCTGGAAAGCAAGATGGAGGTGAAGTGCATCTGGGTATTCTGCAACAGTGGTTTGGAATTCATTGGTGGAATTCCCGGGAATTTGCTCTTCTCTTCACTTTGGTCTTCGTCATGTTTCCTTTGGTATTGTACAAACGTGTAGAGTCCTTGAAGTACAGTTCTGCAGTGTCAACTTTCCTTGCAGTGGCATTTGTTGGCATATGTTGTGGGTTGGCTATTTCTGCACTGGTGCAAGGAAAAACACAAACTCCTAGATTGTTTCCTCGGTTGGACTACCAAACCTCATTCTTTGATCTGTTTACTGCAGTTCCCGTTGTTGTCACAGCCTTCACATTTCATTTTAACGTGCATCCAATTGGGTTTGAGTTTGCCAAGCCATCTCAAATGACAACAGCAGTTCGATTAGCATTATTGCTTTGTGCTGTGATCTACATTTCAGTAGGCTTATTTGGGTACCTATTATTTGGGGATTCAACACAATCAGACATTCTCATCAATTTTGACCAGAGTAATGACTCTGTGGTTGGTTCCTTGTTCAGTACTTTGGTCCGTGTAAGCTATGCACTCCACATCATGCTGGTCTTTCCTCTCTTGAACTTCTCTTTGAGATCCAACATAGATGAAGTTCTCTTCTCCAATAAGCCTATGCTAGCCACAGACAACAAAAGATTCATGATCCTCACTTTGGTGCTGCTTGTATTCTCCTACCTTGCTGCTATAGCAATCCCAGATATTTGGTACTTCTTTCAGTTTCTTGGATCATCATCCGCAGTGTGCCTTGCCTTCATTTTCCCCGGCTCTATTGTTTTACGGGATGCATATGGTATATCAACAAAAAGGGACAAAATTATCGCACTGATAATGATTATACTAGCCGTGGTGACAAGTGTGCTTGCCATCTCCACCAACATATACAATGTTCTCAGTAGCAAGTCATAA 1311 0.4676 MSPAVGASVPLLGESNRAMTPASVSGAVFNVATSIVGAGIMSIPAIMKVLGVVPAFAMIIVVAVLAELSVEFLMRFTHSGETRTYAGVMREAFGSPGALVVQVCVIITNVGALILYLIIIGDVLSGKQDGGEVHLGILQQWFGIHWWNSREFALLFTLVFVMFPLVLYKRVESLKYSSAVSTFLAVAFVGICCGLAISALVQGKTQTPRLFPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFEFAKPSQMTTAVRLALLLCAVIYISVGLFGYLLFGDSTQSDILINFDQSNDSVVGSLFSTLVRVSYALHIMLVFPLLNFSLRSNIDEVLFSNKPMLATDNKRFMILTLVLLVFSYLAAIAIPDIWYFFQFLGSSSAVCLAFIFPGSIVLRDAYGISTKRDKIIALIMIILAVVTSVLAISTNIYNVLSSKS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2563 436 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 434 - -
Pvu1g2563 436 Pfam Transmembrane amino acid transporter protein 22 424 IPR013057 -
Pvu1g2563 436 PANTHER AMINO ACID TRANSPORTER 3 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2563 Pvu-Chr1 50652658 50655633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2563 1 431 Amino Acid or Auxin Permease AAAP Family AT3G56200 58.565 8.02e-180 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2563 - - gmx:100815694 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2563 1 50652658 50655633 Pvu1g2563 1 50652658 50655633 ECH
Pvu1g2563 1 50652658 50655633 Pvu8g2269 8 53206994 53213428 PCT
Pvu8g2268 8 53183101 53185461 Pvu1g2563 1 50652658 50655633 PCT