Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2556 ATGGCCGCTGTATCTAACCTTCATAACAAGACATTGGTATGCCAAGATCCCCACATTTATGGTCACCGTAATGTCTGGCAAGCAGGCAACCCTTTAGAATCCCCCACTTGTCTTTTCTTCATGCAGGTCTCTTTGATGACCATAGTCATACAGTTAATGGACATATGTCTTAAGCCATTAGGACAATCTTCTCTTGTATCCCAGATTCTTGGTGGAATGTTTTTTGGGCCATCAGCTTTAGGGAACCAAAAGATTCTAAGCCAAACCTTGTTCCCAGTAAAGGGTGCCGTTGTGCTTGAGACAATTTCATCGTTTGGGCTCATGTTCTACTACTTCTTATGGAGTCTTAGATTAGACCTTTACACATCGTTGAAGACAGAAAAGATTGCGGTAGTTCTTGCCATATCTGTATTCATGTTTACATTGGTTATCCCCACTGGACTCTCCTTCCTGTTGAAGAAATATATTACAATGAGCAAAAAGGTTGCAAAGGCACTTCCATATGTAGGCCTCTCACAAGCCTATACTATATTCATTAGCATAGCAGTGCTCTTGACAGATCTCAAAGTCCTTAATACTGATATAGGACGATTAACCATGTCAGTAGCAATTCTTAGTAATATAGCTGGCTTTCTTTTGTCAGTGATTACGTTTGCAGTAATGCACAGTGAGAATGGTGATATTCTGACACTAGTATCCATTGGTCTATCCATAACTGCATTCACGCTTGTTATTATATTTATCATGAGGCCAGTGGTACTTTGGATGGTAAAGAACCCAGGTAGAGGTTCGCCTAATGAAGTGTGCATTGTGAGTATCTTTGTGTTCGTTATCCTTACTGGATTTGTGAGTGAAGTACTTGGGCAACATTATCCTATGGGACCAATAATTTTAGGGCTGTCTCTTCCAGAAGGGCCACCCATAGGAACATCTTTGATGAGAATATTGGAGACAATGTGTATGGCTTTCCTTAATCCAATTTGTCTAGCTGTTCACGGATTACAAACTAATATATTCAAAATAGACTTTCATTCTGCATGGACTATCTGCCTCATTCTGGTCGTGGGTTTCTTCACAAAGATTGCTGCTGTCATGTTGCCAGGATACTATTTCAATCTATCAATGAAAGAATCTTGGGTCATTGGTCTCCTTCTAAATGGAAGGGGTATATGTGAGCTTGTCTTGTTCAATTTGTGGTTGCAAAGTGAGATACTGACGGAAGACGAGTTCTCTTTGATGGTACTCTCCGTTATAGTAGCAAATGTTGTCTTAGTACCAATCGTAAAATTCATACATGATCCTTCAAAACCATATGCAAATCTAAGAAGATGCACAATTCAACACACTACGCGAGATTCGGAGCTCCGAATCATGGTGTGCATTGACAACAACGAAAACCTCCCTACAATTCTGAACCTCTTAGAAGCCTCCTATGCTAGCAGAGAGAGCACGATTACGGTTACAACATTAGTCCTGGTGGAGCTTGAAGGAAGAGCCAGACCTATTCTTGTTGATAACCAATTCCTTGAGAGTGCACATCTTGTCTTAGACGAGTCAAGTCGCATTGACAATGCCATGAGGCAATACGCACAACAAAATGGAGAAAATGTCTCCATTCAATCTTTCACTTCAATCTCCTCGTTTGAAACCATGCATGATGATGTTTGTAGAATATCACTCGAATGCGGAGCCAACATTCTGATCATGCCGTTCCACAGGAGGTGGGAAATTGATGGCACTGTGGAGGTTGCACATAGGTCGATCCAAACCATGAACGTTAAAGTCCTCGAAAGGGCACCCTGTTCTGTCGGAATTCTAGTTGACAGGAGCATCTTGAGTTCTTCTCCTTCACTCTCGGGGGCCAGAGCAGCATACTATGTTGTTGTGTTTTTCATTGGTGGTGCAGATGACGCGGAGGCACTAGCTTATGGCGCTAGAATGGCTAGGCATGAGTGTGTGTGTGTGACTGTGGTTAGGTTCCTTCTATTTGGTGAGGAAAACTCCAAGGATAGAAAACGTGACAGTGATCTTATAGATGAGTATAGATACTACAATGCTGGGAATCGCAAGTTTGAGATTTTGGATGAAGTTGTGAAAGATGGAATAGAGATGTCTACATGCATAAGAAGATTGGTGGATTATTTTGATCTTGTGATGGTGGGGAGACAACATCCAGATAGTGTTGTGTTTGAAGGACATGATCCTTGGAGTGAGTGTCAAGAGTTAGGGGTCATTGGGGACATGCTAGCATCACCAAATTTTGTGACCAAGGCATCACTGTTGGTTGTACAACAACAGAGAATAAGAGGAAGAGTTGTTAAATCACAGGTTACTTTGAATCAAGTGCCAAAACAGAGAGATAATGTTCCACTTGACCAAGACTTAAGTCCTTCCTGTAGTATTTTAGTGGACAAATATGACCAAATGTAA 2430 0.4144 MAAVSNLHNKTLVCQDPHIYGHRNVWQAGNPLESPTCLFFMQVSLMTIVIQLMDICLKPLGQSSLVSQILGGMFFGPSALGNQKILSQTLFPVKGAVVLETISSFGLMFYYFLWSLRLDLYTSLKTEKIAVVLAISVFMFTLVIPTGLSFLLKKYITMSKKVAKALPYVGLSQAYTIFISIAVLLTDLKVLNTDIGRLTMSVAILSNIAGFLLSVITFAVMHSENGDILTLVSIGLSITAFTLVIIFIMRPVVLWMVKNPGRGSPNEVCIVSIFVFVILTGFVSEVLGQHYPMGPIILGLSLPEGPPIGTSLMRILETMCMAFLNPICLAVHGLQTNIFKIDFHSAWTICLILVVGFFTKIAAVMLPGYYFNLSMKESWVIGLLLNGRGICELVLFNLWLQSEILTEDEFSLMVLSVIVANVVLVPIVKFIHDPSKPYANLRRCTIQHTTRDSELRIMVCIDNNENLPTILNLLEASYASRESTITVTTLVLVELEGRARPILVDNQFLESAHLVLDESSRIDNAMRQYAQQNGENVSIQSFTSISSFETMHDDVCRISLECGANILIMPFHRRWEIDGTVEVAHRSIQTMNVKVLERAPCSVGILVDRSILSSSPSLSGARAAYYVVVFFIGGADDAEALAYGARMARHECVCVTVVRFLLFGEENSKDRKRDSDLIDEYRYYNAGNRKFEILDEVVKDGIEMSTCIRRLVDYFDLVMVGRQHPDSVVFEGHDPWSECQELGVIGDMLASPNFVTKASLLVVQQQRIRGRVVKSQVTLNQVPKQRDNVPLDQDLSPSCSILVDKYDQM* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2556 809 Gene3D - 37 436 IPR038770 -
Pvu1g2556 809 PANTHER CATION/H + ANTIPORTER 6 778 - -
Pvu1g2556 809 PANTHER CATION/H(+) ANTIPORTER 15-LIKE 6 778 - -
Pvu1g2556 809 Pfam Sodium/hydrogen exchanger family 46 428 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2556 Pvu-Chr1 50607970 50611186 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2556 9 765 Antiporter Super Family AT2G13620 33.418 9.06e-143 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2556 - - gmx:100779700 1117.83