Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2549 ATGAAGGACAGTTCCATAACCACTGTGTATAATGACAGTAGAGCTGGTCATTTGGTGGTTTGTGTGAAGAATGATAGAACTGTAGGCTCTTTTGGCGTGTGGATTGGCGATAATCCATTGGATTTTGTGATTCCTATCACATTGTGTCAACTCATCGTACATGTTTTACTCTCAAAAGCGTTGCATTATGTCCTCAAGACAATTCATATACCCAAATTCATCTGCTCTATCGTCGCGGGAGTTTTGTTGGGGCCAACATTCTTGGGGCGCAATGAAGCATTACTGGGGGCTTTGTTCCCGCTAAGACAAGCTTTGGTTATGAACACGTTGTCCAAAATAGGGACAGTTTATTGTGTGTTCCTCACAAGTCTGAAAATGGATGTAACGACAACATTAAAAGCAGCGAAACGATGTTGGCGATTCGGCGTGTTTCCCTTCTTCGCTTCCTTCTTTGTCACAGCGACCCTGTTCTCTCTGTATTCGCCCCATGCCGCTGACACAGACAAAAGTGAAATGTCGATATACAGCTTCCCCAACGTCTTCACCTTGAGCAGTTTCGCTGTCATCTCAGACACCCTCATGGAACTCAACCTAGTGGCCACGGAATTGGGGCAAATCGCTTTGTCTTCGGCCATGATCACCGAGATACTGCAATGGCTTACGATGGAGCTCCAGTTCAACACAGACATGAGCATAGAAGTTATACTTGTGTTCTTGGCAGGTGCATGCGTGTTCGGTGTGTTGTGTGTTGTTATTGTGAGACCACTGGTGAACGTTGCTGTTGAAAAAACTCTACCCGGGAAGCCAATGAAGGAAGCGTACGTTGTGATGCTTCTTCTGGGGCCACTTATTATGTCAGCTATTAGTGACAGCTTGGGGGTATTCTTCATTATGGGACCTCTTTTCTATGGTTTTATTCTGCCCAATGGACCCCCAGTGGCTACAACGATTATAGAGAGGAGTGAATTGATAGTCTCTGAGTTTTTTATGCCTTTCTTCTACATGTTTATTGGAAAAGGAACAGATTTGACTGGAATTCATGACCATTGGGAGGTGGTTCTAACAGTTTTGGCAATCTTGATTTTGGGATGCGTGGTCAAGGTGGTTGCATGTGCACTTATTTCTCCCTCCTACAAAATTAAGCCCAAACATGGCGTCGTGCTTGGCCTCATATTGAACGTCAAGGGTATAGTGGAACTCATCTTTTTCAATAGAATGAACAAACTCGGGGTAATTGATACAGAAGTATACAGTGTGGCGGTGATATATGTGGTGTTAATCACATCACTTTGCGTACCCTCGATCAAATTATTGTACAGGCACTGTCGCGTAAAGTCAAGCGTACAAGAAGGGCGTGTGAGAACAATCCAAAACATCAAACCAAACACAGACTTCAAAATCGTTTCGTGCCTCCACACGGATCAACACGTGCACAGCATGATTGCCCTAACAGAGGCATGCAACCCAACCACAGAAAGCCCCATCTACCTCCACGTCATCCATCTCATCGAGCTCTCCGGAAAAAGCACACCCATTCTTCTTCCCATGAACAAGAACAACAGAAAATCTTTGTCCGTCAACTACCCCAACACCAACCGCATTTTGCGTGCATACGAGAACTACTCCGAAAACTCAAGTGGTCCTGTGAATGTTCTTTCCTACGTCAACGTTGCCCCGTACAAAAGCATGCACGAAGCGGTTTGCAACCTCGCGGAAGATAACTCGGTGCATCTCCTCGTTATTCCGTTTCACGAAAATGATCAGAGTCTAGGAAGCCACGTGACCAGCACGTTCCGCGAGCTCAACGCAAATTTTGCTGCTAACTCGAAGGGCACGTTGGGGATTCTTGTGGATAGATTCTCGGTGCTGAGTACGAGTATCTCCGAGTTTTCCTTTCATGTGGGTATCTTCTTCATCGGTGGAAAAGACGATAGAGAAGCATTGGCGTTGGGAATTCGAATGGTGGAACGCGGCAACACGCGCGCGACCTTGTTCCGGTTTGTGATATATGGAGGTGTGGAAGACGAAGAGGATATGTTGGAGAAGACATTGGACGAGAGTTTAATAGATGAGTTTGTGGCGAAGAAGGATTATGGTAGTGATGTGGATAACGTTGTTTACAACGAGGTTGTGGTGGAAGATTCCATAAAAGTGTTGGAAGGTATTAGGGAAATAGAGAAGGAGTATGACCTAGTGATGGTGGGGAAGAGACATAGCATGGGGGATTTCAGGGAAGAAGAAATGTCAGTTTTGATGGATAATTGGGATGAGTTGGGAATTTTGGGGGATATGTTAGCATCGAATGAGTTTTGTGAAGGAAAAACTCCTGTGTTGGTGATGCAATGCGGTGAGAAGAAG 2358 0.4534 MKDSSITTVYNDSRAGHLVVCVKNDRTVGSFGVWIGDNPLDFVIPITLCQLIVHVLLSKALHYVLKTIHIPKFICSIVAGVLLGPTFLGRNEALLGALFPLRQALVMNTLSKIGTVYCVFLTSLKMDVTTTLKAAKRCWRFGVFPFFASFFVTATLFSLYSPHAADTDKSEMSIYSFPNVFTLSSFAVISDTLMELNLVATELGQIALSSAMITEILQWLTMELQFNTDMSIEVILVFLAGACVFGVLCVVIVRPLVNVAVEKTLPGKPMKEAYVVMLLLGPLIMSAISDSLGVFFIMGPLFYGFILPNGPPVATTIIERSELIVSEFFMPFFYMFIGKGTDLTGIHDHWEVVLTVLAILILGCVVKVVACALISPSYKIKPKHGVVLGLILNVKGIVELIFFNRMNKLGVIDTEVYSVAVIYVVLITSLCVPSIKLLYRHCRVKSSVQEGRVRTIQNIKPNTDFKIVSCLHTDQHVHSMIALTEACNPTTESPIYLHVIHLIELSGKSTPILLPMNKNNRKSLSVNYPNTNRILRAYENYSENSSGPVNVLSYVNVAPYKSMHEAVCNLAEDNSVHLLVIPFHENDQSLGSHVTSTFRELNANFAANSKGTLGILVDRFSVLSTSISEFSFHVGIFFIGGKDDREALALGIRMVERGNTRATLFRFVIYGGVEDEEDMLEKTLDESLIDEFVAKKDYGSDVDNVVYNEVVVEDSIKVLEGIREIEKEYDLVMVGKRHSMGDFREEEMSVLMDNWDELGILGDMLASNEFCEGKTPVLVMQCGEKK 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2549 786 PANTHER CATION/H+ EXCHANGER 3 20 783 - -
Pvu1g2549 786 PANTHER CATION/H + ANTIPORTER 20 783 - -
Pvu1g2549 786 Gene3D - 46 448 IPR038770 -
Pvu1g2549 786 Pfam Sodium/hydrogen exchanger family 51 430 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2549 Pvu-Chr1 50558008 50560896 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2549 32 781 Antiporter Super Family AT2G13620 31.210 1.70e-127 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2549 - - vun:114176193 1142.49