Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2548 ATGGAGAATCCAGCAAGCAATGTAACAATCACCAGTTATTGGGATCCGCATGCACATTGGGAAGTTTGTCTCCAAAAAGATAGATTTGTGGGGTCTTATGGCATTTTCATTGGGGATCGCCCATTCTCTTTTGTACTTCCTGTGACGTTGTTCCAACTCTTCACCTTCAACTTAATCTCTAGAACCATCTACTTTCTTCTCAGGCCTATAAGAACACCCAGATTCATCTGCAACCTTCTGGGTGGGATTATTTTGGGCCCCACATTTCTGGGACGCAACAAGGCGTATTGGAGAACTCTATTCCCAGAAAGACAATCAGCGGTGCTAGTGTTTTCAGCGTTAACAGGAACCCTATATTTCCTGTTCTTAGTGGCACTGAAAATGGACGTTCTGATGACTATTAGAGCCGCAAAAAGCACGTGGCGACTCGGAGTAATACCCCTCCTCGCTTCATTTGGAGTCATCATTGCATTCTTACGCGTCTTCTATACCCGTCCAGAGTTATCTGCTACACAAGATTTCGTTGCAAGCCTCTCAATAACCGTTGCAATGGCCATCAGCAACTTCCCCGTCATCTCTGATGCATTGATCGAACTCAATCTCATAGCCACAGAGCTCGGTCAGATCGCTCTCTCCTCCTCCATGATCAACGACATCATACTATGGCTCCTCATCATTTTCCACAGCTTCGCCTACGAATCTGATCTCAAAATTACGATGAACCTGTTGGGAAACTGGTCCCTATTCATGTGTTTCATGTATTTCGTGATGCGACCCACCATGAAGCTGATTTCAAGGATAACTCCGGTGGGGAAACCGGTGAACGAGGTGTACGTTGTGTTCATTCTTCTGATGGTACTGGTGATGTCGGCTGTGGGAGACATGATGGGAGTATCGTGTCTGATGGGGCCACTGGTTTTGGGGTTGGTGATACCGAGTGGACCACCCTTGGGCACAACACTTGTGGAGAAGAGTGAGGTTCTGGTCGCCCATGTTCTGCTACCCTTCTTCTTCATGTACGTCGGAATGAAAACGGATTTGTCTGCGCTCAGGGACTGGCGCTTGTTTTTGACTCTGCAGAGTGTCTTCTTCGCCGGAGACTTGGCCAAGTTGTTGACGTGTATTTTGGTTTCTCTAATGTACAACATTAAGCCTAGATATGGCACTTTGCTTGGCCTCACCTTGAACATCAAGGGAATAACTCAACTCATAGGTTTTGTTAGACTCATGAAAGTCCAGGTGTTGGATAATGAAACATTCAGTCAACTGGTGTTCTGTGTGGCGCTTATCACCGCGATCGTTACACCATTGATTAACTTACTGTACAAGCATCGACCTCGAATCCTACAGACAGCAAACTTATACAAAGGCCATGTGAGAACCATCCAAAGCACTCCAAGAAACACAGAGTTTCGCATCATTTGTTGCGTCCACAACGAAGACAATGTTCGTGGCGTCACTGCTTTGATAGAGGTGTGCAGCCCCGTGCTAGAGAGCCCCATAGCCATTTACGCCGTACACCTCATCGAGCTTCTAGGAAAAAGCACACCCATTCTCATTCCCATAAACAATGGACTAAAATCTCTCTCCGTTAACTATCCCAACACCAACCACATCATGCGAGCCTTCCAAAACTACTCCAACAACTCAAGTGGACCCGTCACGGTTTGCCCCTACGTCAACGTGGCATCCTACAAGAGCATGCACGATGCCATCATTACCCTCGCAGAAGAAAAGATGGTGCCTTTCATCCTCATCCCCTTCCCCGAAAACGACAACGTTAATCACGTGGGACACGTGGCAGCATCCATCCGCAAAATGACCGCGAGCTTTCAAGCGCATGTTCCGTGCACGTTGGGGATTCTGGTGGACAAGCACTCGCGGCTGGGCACGTTCAACAGCGACGTGGTTTTCAACGTGGCGGTGTTCTTCATAGGTGGGGCCGACGACAGGGAAGCGTTGGCGTTGGGGATGCGGATGTTGGAGCGCGAGAAAACGAGGGTGTCGCTGTTCCGGTTCGTGGTGAACAACAGAGAGTACGGTAACAAAATTGTTCTGACGAAAGAGGAACGTGAAGAGGAAGAGGAGGATATGCTGATGGACGAGGGGTTGATCGATGAGTTCAAGGGCATGAAATATGGGAGTGGTAATGTTTCTTGGTACGAGATTTTCGTGGAGGATGGGGTGGCGGTGTTGGACGCAGTGCATAGTTTGGAGGGAAACTATGACCTTGTGATGGTTGGAAGAAGGCACAACGATGGGTCTCTGGATTCAGAGGAAATGGCAACGTTCATAGAGAATGCTGCTGTGTTGGGAATATTGGGTGATATGCTCTCTTCAACGGAGTTTTGCATAGGGATGATTCCCGTTCTGGTGACACAGTGTGGAGGGGTCAAGCTAACTAGCAGTAACAAGCTCGATAAAATATCTTCAACTAATTTATCTCTAAAGAGTTTTTCTGACACTAAATAA 2472 0.4765 MENPASNVTITSYWDPHAHWEVCLQKDRFVGSYGIFIGDRPFSFVLPVTLFQLFTFNLISRTIYFLLRPIRTPRFICNLLGGIILGPTFLGRNKAYWRTLFPERQSAVLVFSALTGTLYFLFLVALKMDVLMTIRAAKSTWRLGVIPLLASFGVIIAFLRVFYTRPELSATQDFVASLSITVAMAISNFPVISDALIELNLIATELGQIALSSSMINDIILWLLIIFHSFAYESDLKITMNLLGNWSLFMCFMYFVMRPTMKLISRITPVGKPVNEVYVVFILLMVLVMSAVGDMMGVSCLMGPLVLGLVIPSGPPLGTTLVEKSEVLVAHVLLPFFFMYVGMKTDLSALRDWRLFLTLQSVFFAGDLAKLLTCILVSLMYNIKPRYGTLLGLTLNIKGITQLIGFVRLMKVQVLDNETFSQLVFCVALITAIVTPLINLLYKHRPRILQTANLYKGHVRTIQSTPRNTEFRIICCVHNEDNVRGVTALIEVCSPVLESPIAIYAVHLIELLGKSTPILIPINNGLKSLSVNYPNTNHIMRAFQNYSNNSSGPVTVCPYVNVASYKSMHDAIITLAEEKMVPFILIPFPENDNVNHVGHVAASIRKMTASFQAHVPCTLGILVDKHSRLGTFNSDVVFNVAVFFIGGADDREALALGMRMLEREKTRVSLFRFVVNNREYGNKIVLTKEEREEEEEDMLMDEGLIDEFKGMKYGSGNVSWYEIFVEDGVAVLDAVHSLEGNYDLVMVGRRHNDGSLDSEEMATFIENAAVLGILGDMLSSTEFCIGMIPVLVTQCGGVKLTSSNKLDKISSTNLSLKSFSDTK* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2548 823 PANTHER CATION/H + ANTIPORTER 7 810 - -
Pvu1g2548 823 Pfam Sodium/hydrogen exchanger family 59 437 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Pvu1g2548 823 PANTHER CATION/H+ EXCHANGER 3 7 810 - -
Pvu1g2548 823 Coils Coil 677 697 - -
Pvu1g2548 823 Gene3D - 48 448 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2548 Pvu-Chr1 50552979 50555922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2548 2 794 Antiporter Super Family AT2G13620 32.094 7.88e-130 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2548 - - gmx:106794183 1155.58