Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2536 ATGAACAACAAAAACTGGAAATCCAGCTGCTTCAGGGATCCTGTGTTCCTTCTGGCGTTGTGTTTGTTGTTTCAGAACTTTAGTTGCTGTTGCTCTTTGAATGAAGAAGGTAAAGCTCTTCTGAAGTTCAAGCAGGGAATAGTTAGAGACCCTTTTGGTGTTTTGTCAAATTGGGTTAACGATGAAGTAGCAGTTAACCATTGTAATTGGTTTGGTGTTGAGTGCTCTGCTGGAAGGGTGGTAGTCTTGAATTTGAAAGACCTTTGTCTTGAAGGAAATCTGGTACCTGAGCTCGCAAACCTTGTTCACATAACGTCCATAATTTTGCGGAACAATTCTTTTTATGGAATCATCCCTGAAGGGATTGCACACTTGAATGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGACATCTACCTAAAGATCTTGGGAATAATATTTCTCTAACAATTCTTTTGTTGGACAACAATGATCATCTCTGTGGTTTCTCTCCTGAAATTAATAAATTGAAGATGATTTCTGAATATCAAGTAGATGAAAGACGACTAAGTATGGCAGGAAAAGTGCCAGCTTGTACAAGAAGATTCATCAAACGGCACATTGACAAAAATAAGAAAGGTTCAAGGAGGCTACTGCAATTTCTTCCTCGTGGTAGAGTAAGTCCTTTTGACCGTACTGCTACTTTGCCTGATAGTCCTGCTCCATCACCTTCAGCACCCTCACTGGCCCCAGCAACACCACCGGTTGAGAAGCCAGCTTCCGCTGACCGAAATGATTCTGCTTCTACTTCTCCTTCTCCTCTGCCTGAACCAAGCTCTGGACCACCATCTAAAAGTAACTCATCAAACAACAATCTTGTTCGTATTTTGGCTGGAGTTATAGGTGGCTTTGCATTTGTTGTCATTTCAATCATTGGCATATATCTCTGGAAAACAAACAAGGTGGCTACTGTAAAACCTTGGGCCACAGGATTAAGTGGACAGCTTCAGAAGGCATTCGTAACGGGTGTGCCAAAGCTGAAGAGATCAGAGCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGCACTTCATCCCTTGGCACTGTGTACAAAGGGACTTTGTCCAGTGGTGTTGAAATAGCTGTGGCCTCTGTTGCAGTGACAGAATCAAAAGATTGGTCAAAGACTTTAGAAGCCCAATTTAGGAAGAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTAAATCTTCTTGGACATTGTGAAGAAGACGAGCCTTTCACCAGAATGGTGGTTTTTGAATACGCCCCAAATGGAACTCTCTTTGAGCATTTACACATAAAAGAAGCTGAGCACTTGGATTGGGAAACAAGACTTAGAGTTGCCATGGGCATGGCTTACTGCCTACAACATGTGCACCAGTTGGAGCCTCCTTTGGTTCTTGGCAACCTGAATTCTTCAGCTGTTCAACTCACTGATGATTGTGCTGCCAAAGTCTCTGATTTTAGTTTCTTAACTGAAATAGCTTCAGCTGTGATAAAATCTTCTGCTAGACAGCACCCTGACATGACCCCAGCAAGTAACATTTACAGTTTTGGTGTTATATTATTTGAAATGGTGACAGGCAGGCTTCCTTATTCTGTGGACAATGATGGCTCACTTGATGACTGGGCTTCACAATATTTACATGGGGATCAGCCCCTCAAAGAAATGGTGGATCCAACTCTAGCGTCCTTCCAAGAAGAACAGCTGCAACAAGTTGATACTTTAATCAAATCTTGTGTCCATCCTGATCAAAAGCAAAGACCAACTGTGAAAGAGGTTTGTGCGAGATTAAGAGAGATAACAAAAATAACACCCGAAGCTGCTGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTGCTTCAGTAAATGGAAACTGA 1932 0.4172 MNNKNWKSSCFRDPVFLLALCLLFQNFSCCCSLNEEGKALLKFKQGIVRDPFGVLSNWVNDEVAVNHCNWFGVECSAGRVVVLNLKDLCLEGNLVPELANLVHITSIILRNNSFYGIIPEGIAHLNELEVLDLGYNNFSGHLPKDLGNNISLTILLLDNNDHLCGFSPEINKLKMISEYQVDERRLSMAGKVPACTRRFIKRHIDKNKKGSRRLLQFLPRGRVSPFDRTATLPDSPAPSPSAPSLAPATPPVEKPASADRNDSASTSPSPLPEPSSGPPSKSNSSNNNLVRILAGVIGGFAFVVISIIGIYLWKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSSLGTVYKGTLSSGVEIAVASVAVTESKDWSKTLEAQFRKKIDTLSKVNHKNFVNLLGHCEEDEPFTRMVVFEYAPNGTLFEHLHIKEAEHLDWETRLRVAMGMAYCLQHVHQLEPPLVLGNLNSSAVQLTDDCAAKVSDFSFLTEIASAVIKSSARQHPDMTPASNIYSFGVILFEMVTGRLPYSVDNDGSLDDWASQYLHGDQPLKEMVDPTLASFQEEQLQQVDTLIKSCVHPDQKQRPTVKEVCARLREITKITPEAAVPKLSPLWWAELEIASVNGN* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2536 643 Gene3D Phosphorylase Kinase; domain 1 325 435 - -
Pvu1g2536 643 Gene3D Transferase(Phosphotransferase) domain 1 436 624 - -
Pvu1g2536 643 SUPERFAMILY Protein kinase-like (PK-like) 336 612 IPR011009 -
Pvu1g2536 643 PANTHER BNAA09G55080D PROTEIN 3 642 - -
Pvu1g2536 643 MobiDBLite consensus disorder prediction 225 284 - -
Pvu1g2536 643 Pfam Leucine rich repeat N-terminal domain 34 76 IPR013210 -
Pvu1g2536 643 Pfam Protein tyrosine and serine/threonine kinase 355 611 IPR001245 GO:0004672|GO:0006468
Pvu1g2536 643 SUPERFAMILY L domain-like 33 174 - -
Pvu1g2536 643 MobiDBLite consensus disorder prediction 236 250 - -
Pvu1g2536 643 ProSiteProfiles Protein kinase domain profile. 353 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2536 643 PANTHER PROTEIN MALE DISCOVERER 2 3 642 - -
Pvu1g2536 643 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2536 Pvu-Chr1 50447480 50452182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2536 16 612 Receptor kinase-like Gene Family AT5G16000 25.559 3.44e-47 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pvu1g2536 PK_Tyr_Ser-Thr 3.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2536 - - gmx:100784541 1030.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2536 1 50447480 50452182 Pvu8g2296 8 53430154 53434271 PCT