Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2530 ATGCCCCCAGAATCTTCTCACAAATCTTTCACACTCACCATGCTACACTCAACAAATAAATACCACCCTCTCACACAACCACCAACAACAACGCAAACCAAACCAAACAAAACCTTAAAACTTAAAACTACCCAGTTGCTAAAAATGGTGCGTGTCAAAGAAGCTCATGTTGTCACGCCGTCAGAGCCCACACCCAACACTGTTCTCGCACTCTCAGCACTCGACTCCCAACTCTTCCTGCGCTTCACAATCGAGTATCTCTTTGTTTACAGGCCCGGCCCGGGCCTGGACCGCTCTTCAACCGCCGCTCGTTTAAAAACCGCATTAGCTAAAGCGCTTGTTCCTTATTATCCATTTGCTGGAAGAGTCCGGGCCCAGGCCGAAGGGCTGGGCCTCGAGGTGGTGTGTCGGGCCCAGGGTGCTGTCTTCATCGAAGCCTCTTCCGAACGTTTCAGCGTCACTGATTTCCAAAAGGCCCCCAAAACAGTGGCCCAATGGAGAAAGCTCTTGTCGCTCTACGTCACTGACGTCCTCAAAGGCTCGCCGATTCTCGTCGTCCAGCTGACTTGGCTCGCCGACGGGGCCGCCGCCGTCGGCGTCGGAATCAACCACTGCATCTGCGACGGCATCGGCAGCGCTGAGTTTCTTAACTATTTCTCCGATTTGGCCTCGGAGAAATGTCAGAGTCTGGGTGCGAGTGCGAGTGTGGATCCGAAACCGGTTTGGGATCGACATCTTCTGAATCCGGATAACAGAAGCGAGGCAAATCCAGCCATGCATGGCGAGTTTGGTGGAGTTCCTGATTTGTGCGGGTTCATGAACCGTGTGACGAGCAGGTTGAAACCTACTTGCATTGTGTTGGACGAGAGACGGATCGAGGCGCTGAAGCGCGCGTGCGGAGGAGCGTCGTGCACGTCCTTCGAGGTGGTGGCCGCGCACGTGTGGAGGAGCTGGGCTCGGGCGTTGGGGTTTCCGAAGAACCAGACGCTGAAGCTTTTGTTCAGCGTGAACGTGCGGAAGCGCGTGAAGCCGGGTTTGCCGGAGGGGTATTACGGGAACGCGTTTGTGTTGGGGTGCGCGCAGAGCAGCGCGTGGGAGTTGGGGGAGAGAGGGGTGGCTTACGTGCGCGGTGTGGTGAAGCGTGCGAAGGAGAGGGTGGACAGCGAGCACGTGCGGAGGGTCGTTGAGTTGGTGTCCGAGTCAAGGGCGAGTCCTGACTCGGTGGGGGTGTTGATTCTGTCGCAGTGGTCGAGGTTGGGTTTGGAGAGGGTTGAACTCGGAATGGGAAAGCCTCTGCATGTGGGACCCATTTGCTGCGATAGGTACTGTTTGTTTCTTCCGGTGACCGGTGAACGGCACAGTGTGAAGGTCATGGTGGCTGTCCCCACCGCCGCCGTGGACAATTTCCATCGCTTCCTCCGGGAATCCAATTCATGA 1437 0.5644 MPPESSHKSFTLTMLHSTNKYHPLTQPPTTTQTKPNKTLKLKTTQLLKMVRVKEAHVVTPSEPTPNTVLALSALDSQLFLRFTIEYLFVYRPGPGLDRSSTAARLKTALAKALVPYYPFAGRVRAQAEGLGLEVVCRAQGAVFIEASSERFSVTDFQKAPKTVAQWRKLLSLYVTDVLKGSPILVVQLTWLADGAAAVGVGINHCICDGIGSAEFLNYFSDLASEKCQSLGASASVDPKPVWDRHLLNPDNRSEANPAMHGEFGGVPDLCGFMNRVTSRLKPTCIVLDERRIEALKRACGGASCTSFEVVAAHVWRSWARALGFPKNQTLKLLFSVNVRKRVKPGLPEGYYGNAFVLGCAQSSAWELGERGVAYVRGVVKRAKERVDSEHVRRVVELVSESRASPDSVGVLILSQWSRLGLERVELGMGKPLHVGPICCDRYCLFLPVTGERHSVKVMVAVPTAAVDNFHRFLRESNS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2530 478 Pfam Transferase family 49 470 - -
Pvu1g2530 478 Gene3D - 49 263 IPR023213 -
Pvu1g2530 478 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 51 472 - -
Pvu1g2530 478 Gene3D - 274 475 IPR023213 -
Pvu1g2530 478 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 51 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2530 Pvu-Chr1 50417584 50419586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2530 50 475 Monolignol Biosynthesis Gene Families AT5G48930 27.902 5.46e-45 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2530 - - pvu:PHAVU_001G244800g 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2530 1 50417584 50419586 Pvu8g2300 8 53471794 53473113 PCT