Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2518 ATGGCTAATAACGCAGTTGATGCAAGGAGTTTCAGTTGGGCAGTGGACAGTGCCATAGCGAGTGAGAGTGCGTCAAATTTGGGAGAATCTCGTGTCCACAGTTTTGCTTCGGTAGTGGACGGTGCCATAAGGAGTAGCACTGCTTCTGAAGCGGATTTGGGAGAATCTCGTGTCCACAGTTTTGCTTCGGTAGTGGACGGTGCCATAAGGAGTAGCACTGCTTCTGAAGCGGATTTGGAAGCATTCCCAACCCATTATTTTGCTTTTGCTTCTGCGTGGGACAAAAGAACTGTTGCTGCACGATTATTCACCCTGGCTGAGCTTAAAGCAGCCACCAACAATTTCTCAATTCACAACAAGATTTTTTGTGCTGGAAGCATTAGTGTTGTGCACAGAGGCAAGCTCTTTGATGGTCGTCAGGTGGCTGTCAAAAGGGCTGAAATCAGTTCCAAGATGAAGGAGTTTCAAGAGAGATTTGGCTATTTATGGACCCTTTTGCTCCGTCTACACCATAAGCACTTGGTTGGCCTAGTAGGGTTCTGTAAAGATAAAGATAAAAGGTTGTTGGTGTACGAGTACACGAAGAATCGGGCGTTATATGATTATCTGCATGACAAAAACAACGTGGACAGGGAGAGCAGTGCGTTGAATTCTTGGAGAATGAGGATCAAGGTTGCTTTGGATGCTTCCCGGGGAATAGAATATCTTCATAAACATGTAGTTCCATCCATTATTCACAGAGACATCAACTCCTCCAACATTCTTCTTGATGCAACTTGGACAGCAAGAGTATCTGGTTTTGAATCGTCGTGTTTCATGAGTCCAGAAGCTGAGCATGTTTACTCCGATACACGTGTGTTGACAGCAAAGAGTGATGTGTACGGGCTTGGAGTTGTGCTGCTTGAACTTTTAACAGGAAAGAAGACCACGTTAAAGTTTGGGATAAATAGAGAGACAAGTATGGTGAAGATCGCAGGGCGTGTTATTTTGGGTTGGAAAATGGTGAAAATTTTGGATCCAAGGGTTGGAGCACCCCATGTTAATGAAGAAGCAGAGGCACTGGAAATAGTGGCCCATACAGCGGTTAGTTGTGTAAATTCGAAAAGGAAAGATAGGCCAACTATGACTCAGGTAGTGGCCAATTTGGAGACTGCTTTAGCTCTTTGCGATAGTGCTGACTACGCTGTTGTCGTAGGGCACACGTTTGGGGCAAGCAAGGAATGA 1224 0.4518 MANNAVDARSFSWAVDSAIASESASNLGESRVHSFASVVDGAIRSSTASEADLGESRVHSFASVVDGAIRSSTASEADLEAFPTHYFAFASAWDKRTVAARLFTLAELKAATNNFSIHNKIFCAGSISVVHRGKLFDGRQVAVKRAEISSKMKEFQERFGYLWTLLLRLHHKHLVGLVGFCKDKDKRLLVYEYTKNRALYDYLHDKNNVDRESSALNSWRMRIKVALDASRGIEYLHKHVVPSIIHRDINSSNILLDATWTARVSGFESSCFMSPEAEHVYSDTRVLTAKSDVYGLGVVLLELLTGKKTTLKFGINRETSMVKIAGRVILGWKMVKILDPRVGAPHVNEEAEALEIVAHTAVSCVNSKRKDRPTMTQVVANLETALALCDSADYAVVVGHTFGASKE* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2518 407 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 7 72 - -
Pvu1g2518 407 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 53 393 - -
Pvu1g2518 407 Gene3D Phosphorylase Kinase; domain 1 86 193 - -
Pvu1g2518 407 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 7 72 IPR044815 GO:0004674
Pvu1g2518 407 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 53 393 IPR044815 GO:0004674
Pvu1g2518 407 SUPERFAMILY Protein kinase-like (PK-like) 99 382 IPR011009 -
Pvu1g2518 407 ProSiteProfiles Protein kinase domain profile. 116 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2518 407 Pfam Protein kinase domain 124 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2518 407 Gene3D Transferase(Phosphotransferase) domain 1 195 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2518 Pvu-Chr1 50293967 50295727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2518 100 399 Receptor kinase-like Gene Family AT3G55950 50.606 2.22e-90 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pvu1g2518 Pkinase 8.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2518 - - vra:106757051 508.449