Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2517 ATGGACAGTGAAAGCGTTGAGAGCATTGAGATGTGGAATTATGGTTCATTTGATGCATTCAGTTTTAGTTTGGCAGTGGACAATGAGATTAGGAGTGGGACTTCGTCAAATTTGGGAGCATCTTCCCCTCTCCATAGTTTTGCTTCGCTTCTGGACATTGCCATAAGGAGTAGAACTTCTTCAAACTGGGAAACATCTTCTGCCAATTCTTATGCTTTTGGATTGGACAATGCAATAAGGAGTAGGACTTCGTCAAACTTGGAAACATCTTCTGCCTATTCTTTTGCTTTTGGAGTGGACACTGCAATAAGGAGTAGGACTTCGTCAAACTGGGAAACATCTTCTACCCATTCTTTTGCTTTTGAAGAGGACAGGACTCCATCAAATTTGGGATCTTTCCGTGTGCCCAGTTTTTCTTCGGGAGTGGACTATGTGATTAGGAGTAGTAGCGGAGGAACAGATTCAGAAACCTCCCCTGTTCATAGTTTTGCTTTTGCTGCAGGAGCATCACAAATGGCGGCGAATGTCACAGGACACGTTGCTAAAGGCTTACAGTTATTCAGCCGGGAAGAGCTTGTAGCAGCCACCAACAATTTTTCACTTCACAACAAGATTGGAGTTGGAAGCTTTGGCGTCGTGTACGGAGGCTTACTTGTTGATGGTAGGGAGGTAGCCATCAAAAGGAACGAAACCAGTCCCAAGATGAAGGAGTTTCAAGAGATTGTGTTTGGGTATTTAGTGACCTTCTTGGGTCGTCTACACCACGAGCAGCTGGTGGGGCTAGTTGGGTTCTGTGAAGAAGAAGATGAGAAACTCTTGGTGTATGAGTACATGAAAAATGGGTCGTTGTATGATCATTTGCATCACAAGGGTAGCGTTGAGTTGAATTCGTGGAAAATGAGGATCAAGATTGCTTTGGATGCTTCCCGAGGAATAAAATATCTTCATTACTATGCAGGCAGTAGGAACCATCATTGA 978 0.4387 MDSESVESIEMWNYGSFDAFSFSLAVDNEIRSGTSSNLGASSPLHSFASLLDIAIRSRTSSNWETSSANSYAFGLDNAIRSRTSSNLETSSAYSFAFGVDTAIRSRTSSNWETSSTHSFAFEEDRTPSNLGSFRVPSFSSGVDYVIRSSSGGTDSETSPVHSFAFAAGASQMAANVTGHVAKGLQLFSREELVAATNNFSLHNKIGVGSFGVVYGGLLVDGREVAIKRNETSPKMKEFQEIVFGYLVTFLGRLHHEQLVGLVGFCEEEDEKLLVYEYMKNGSLYDHLHHKGSVELNSWKMRIKIALDASRGIKYLHYYAGSRNHH* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2517 325 Gene3D Transferase(Phosphotransferase) domain 1 183 325 - -
Pvu1g2517 325 ProSitePatterns Protein kinases ATP-binding region signature. 205 227 IPR017441 GO:0005524
Pvu1g2517 325 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 1 321 IPR044815 GO:0004674
Pvu1g2517 325 SUPERFAMILY Protein kinase-like (PK-like) 181 317 IPR011009 -
Pvu1g2517 325 ProSiteProfiles Protein kinase domain profile. 199 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g2517 325 Pfam Protein tyrosine and serine/threonine kinase 200 316 IPR001245 GO:0004672|GO:0006468
Pvu1g2517 325 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2517 Pvu-Chr1 50289347 50291144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2517 187 319 Receptor kinase-like Gene Family AT3G55950 67.857 6.80e-55 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pvu1g2517 PK_Tyr_Ser-Thr 2.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2517 - - pvu:PHAVU_001G243500g 640.188