Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2510 ATGACTAACTACTATGATATTGATGATATTGTTATGGAAGAAGGGATTGTGTCAGTTATATTTCAGAAAGCTGCATCTGGAGTTGGAATAGATCCCAGTTCTGCAATGGACTTTATTGAAACAGGTTCAAAAGTTGAATTGCCTTTTTGGCTTGCTCACGAGTTACAGATGAGACAGGCAGTATCAGTCAACGTTCCCTCTTGTTTTGATCAAAAAACAAGGCTAGAGATCCAAGCTGATTCGGCCGGTGTGGATCTGAGGTCCAGATGTCCATTCTTTTATGATTTTGGTTGCAAGATAGCACCCATAGTTGGCGACCGAACCATTGGGTTTCTGCTGTTGTCTGCTTTTAAAAGTAGGTATAAGGAAATTCTCACGAAGGCACATTCTGTAGCATTTCCTGCTGGTTCCAAATTTTGGACTATTCTTACAAAAGAAGAGATCAACTTGTATGAGACCGCTCAATCCGCAATGGCATCCTTCAAGAAGTGGCGAATGGGAGGGCCCAGATTTCAGATAGCTTCTGTTCTGGGAAAAAAGAGAAAATCCACTGAATAG 558 0.414 MTNYYDIDDIVMEEGIVSVIFQKAASGVGIDPSSAMDFIETGSKVELPFWLAHELQMRQAVSVNVPSCFDQKTRLEIQADSAGVDLRSRCPFFYDFGCKIAPIVGDRTIGFLLLSAFKSRYKEILTKAHSVAFPAGSKFWTILTKEEINLYETAQSAMASFKKWRMGGPRFQIASVLGKKRKSTE* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2510 185 CDD GINS_A_psf3 61 167 - -
Pvu1g2510 185 Gene3D - 1 167 IPR038437 -
Pvu1g2510 185 Pfam GINS complex protein 45 148 IPR021151 -
Pvu1g2510 185 SUPERFAMILY PriA/YqbF domain 1 66 - -
Pvu1g2510 185 PANTHER UNCHARACTERIZED 1 184 IPR010492 -
Pvu1g2510 185 SUPERFAMILY GINS helical bundle-like 65 166 IPR036224 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2510 1 184 Core DNA Replication Machinery Family AT3G55490 64.674 4.01e-92 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2510 K10734 - gmx:100799874 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2510 1 50247183 50250921 Pvu1g2510 1 50247183 50250921 ECH