Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2508 ATGGCTGATAAAGGAACGGAAGATCAATACTTGAAACGACGCGTAACTACAGGATGTTACGACGTGGATGTGTCAAATGCGAATGAAATATGGAAAAGTGAAACCGTTTTATTCTTTTACCTTCCTACCTTGGCAGCCCAAGTTGCTTTCATGTTGTTATCCACTCGTATTTTGTACTATCTCCTCAGACCCTTAAACCAACCACGTCTTGTTTCTGAGATTTTGATGGGTATTATGATAAGTCCAGAACTATTTGGATCATCAGCTTTATCTGAGGTTCTGACCCCTTTGAAGTCAATCCTAACAACTGAAACCATATCATACGTGGGACTCATTTACATGGTCTTCCTGGCTGGTCTGGACATGAATTTCGACACAATATTCCTACGAGGAAGAAAGAAGGCCACAAGCATTGCCATTGCTGGCGTTGTGATTCCAATGTTTTGTGGGGGTTTCATATATGCTCTGGCTCTAAAAATGTACAAGGGACCCTCAGAGTATTGGGCAAATTTCGACACCCCAAAGGCTTATATGTTTTGGACCTTAATTTTGAGTGTCACAGGTTTTCCTATGGTTAGTCACATTCTTGCAGATCTGAAGCTCCTCTACACAGGACTTGGCAGAGTGACCTTAACAACAGCCATGATCAGTGACTTTTATAATTGGGTCATGTTTGCAATGTTGGTTCCGTTTGCCATAAACGGTGGAAGTGCCATCTACTCGGTGCTGAGCACTATAATTTATGTGCTTTTCTGCTTCGTTCTGATACGTCCTTATTTGGTGGATATAATAGTGCGAAAAACCAATCAAAATGAGTGGGACAATAACGGGTTGTTCATTGTGGTGATGGGAGCATATGCTTCTGCAGCAGTCACGGATCTGCTAGGGACACACCCTGTTGTTGGGGCTCTGGTTTATGGAATAATGATACCTCGTGGCAAATTTACTCACTTGCTCATAGAGAGGTCAGAGGATTTTGGGGTTGTTTATCTGGCTCCATTGTTCTTTGGTAGTTGTGGCATAAGGCTGAGAGCAATATATGTCATAAAAACTCAAGGTTTGGGCCTGGTGCTCTTCATTTTGCTCCTCTCATTCCTCCCAAAGATTTTAAGCACAGTAATAGCCACTCAGTTTTATGGCATGTCTGTTCTTGATGGTTTGTCTATTGGACTGCTCATGAACACCAAGGGCATCCTACCAATATTAATGCTCAACAGTGCCTGGGACAAACAGATTTTGAGTGTGGAGTCCTTCTCAATTTTGACAATAGCTGTTCTGATAATGACCATGATGGCGCCTCTTATCATAAACGCTATATACAAACCAAGAAAGCTATACAAACAAAACAAACTCAAGACCATACAAAACTTAAAGGCCGAAGTAGAGCTGCGAATTTTAGCATGTGTCCACAACCCTCGACAAGCCACAGGAATGATCAACATGCTTGAAGCATATCACACCACAAAGCTCTCCTCTCTGCGTGTGTTTGCACTTCAGCTTGTTGAACTAAGTGGACACACCGCATCCCTTTTGGCTTCCCACATCAACAAGTACAACCAACAGCAGAGTGGTGGACAAGCCCTCACCAAACCACAGGAAGACTTGGAGAGCATCACCAACATTTTCAAAACATTCGCAGCCATAAATGAGCACAGCAACGTGGAGATCATTGCAGCAGTATCCTCCTATTCAACCATTCACGAGGACATATACAACGTCTCACAGGAGAAACAAGCAAACCTGATTTTCCTTCCTTTCCACAAGCAATCAAACATAGAGGGCATTCTAGAGACAGCCAACACTGTTTTCCAAGAAATAAACCGCAATGTGATGAGAGATGCACCATGCACCGTTGGAATCTTTGTTGACCGTGGACTTGCATCGTTGTTCAAGGTGAACTTGCGAGTGGTTATGGTTTTCATCGGAGGCCCTGATGACCGTGAAGCCTTGGCTGTTGCATGGAGGATGTCAAAGCATCAAGGGGTGCAACTGTCTGTGGTGAGGATTCTCATGTTTGGTGAGGCTGCAGAGGTTGATGTTATGTCGCAGGTTGAGTCTCATGGACTGTTATCTGTGGTGGTAGACAGTGAGAAGCAGAAGGAGTTGGATGATGAGTACGTGAGTGCATTCAGACTGAAAGCAGTGAGCAATGAGGATTCTATAAAGTATTCAGAGAAAGAAGTTCGGTGTCGTGAAGATATTCCTGAAGTGCTTAATCAGATTGACCAAATTGGTTATGATTTGTATATTGTAGGTGAAGGAGCAGGTAGAAACTGTTTGATATTGTCAGAGTTGATGAAATGGACTGATTGTCCTGAACTTGGTGTGGTAGGGGACATTTTGGCATCCAATAGTTTTGGTTCAAGCTCTTCTCTGCTTATTATACAGCAATATGGGTTTGGGGGAATGGCGTTTGAGAACACTAATATCACACACCATCCTAAGGAACATGATTCTGGGACAGTTTTTGGGGAGCTATAG 2481 0.4317 MADKGTEDQYLKRRVTTGCYDVDVSNANEIWKSETVLFFYLPTLAAQVAFMLLSTRILYYLLRPLNQPRLVSEILMGIMISPELFGSSALSEVLTPLKSILTTETISYVGLIYMVFLAGLDMNFDTIFLRGRKKATSIAIAGVVIPMFCGGFIYALALKMYKGPSEYWANFDTPKAYMFWTLILSVTGFPMVSHILADLKLLYTGLGRVTLTTAMISDFYNWVMFAMLVPFAINGGSAIYSVLSTIIYVLFCFVLIRPYLVDIIVRKTNQNEWDNNGLFIVVMGAYASAAVTDLLGTHPVVGALVYGIMIPRGKFTHLLIERSEDFGVVYLAPLFFGSCGIRLRAIYVIKTQGLGLVLFILLLSFLPKILSTVIATQFYGMSVLDGLSIGLLMNTKGILPILMLNSAWDKQILSVESFSILTIAVLIMTMMAPLIINAIYKPRKLYKQNKLKTIQNLKAEVELRILACVHNPRQATGMINMLEAYHTTKLSSLRVFALQLVELSGHTASLLASHINKYNQQQSGGQALTKPQEDLESITNIFKTFAAINEHSNVEIIAAVSSYSTIHEDIYNVSQEKQANLIFLPFHKQSNIEGILETANTVFQEINRNVMRDAPCTVGIFVDRGLASLFKVNLRVVMVFIGGPDDREALAVAWRMSKHQGVQLSVVRILMFGEAAEVDVMSQVESHGLLSVVVDSEKQKELDDEYVSAFRLKAVSNEDSIKYSEKEVRCREDIPEVLNQIDQIGYDLYIVGEGAGRNCLILSELMKWTDCPELGVVGDILASNSFGSSSSLLIIQQYGFGGMAFENTNITHHPKEHDSGTVFGEL* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2508 826 Pfam Sodium/hydrogen exchanger family 50 439 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Pvu1g2508 826 PANTHER CATION/H + ANTIPORTER 16 811 - -
Pvu1g2508 826 PANTHER CATION/H+ EXCHANGER 3 16 811 - -
Pvu1g2508 826 Gene3D - 464 772 - -
Pvu1g2508 826 Gene3D - 43 449 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2508 Pvu-Chr1 50220095 50223825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2508 19 824 Antiporter Super Family AT2G13620 34.841 2.07e-171 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2508 - - vun:114191181 1418.68