LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu1g2504	ATGGTTTCTCTGCCAACACTCCTCTTATTAATCGCCGCCTTCGCCGCCGCGATGTTCCTCCGCCGCGCGTTGAACCGTCGGAAGTTTCGGCTGCCGCCGGGGAGCTACGGCCTTCCGTTCATCGGCGAGACTTTGCAGCTGATATCCGCGTACAAGAGTTCCAATCCGGAGCCGTTCATGGACGAGCGCGTGAGGCGCTACGGGTCGATCTTCACGACGCACGTGTTTGGCGAGCCGACGGTGTTCTCGGCGGACCCGGAGCTGAACCGGTTCATTCTGCAGAACGAAGGGAAGCTGTTGGATTGCAGTTACCCCGGTTCCATATCGAACCTGCTTGGAAAACACTCTCTTCTGTTGATGAAAGGCGCTCTCCACAAGAGAATGCACTCGCTCACCATGAGCTTCGCCAACTCCTCCATCATCAAGGATCACCTTCTCCACCATATCGACCGCCTCATCGGCCTCAACCTCGATACCTGGTCCGATCGTGTTACTCTCATGGACCAGGCAAAAAAGATTACGTTTGAGCTAACAGTGAAGCAGTTGATGAGCTTTGACCCTGATGAATGGACTGAGAGTTTGAGGAAAGAGTATGTTCTTGTCATTGAAGGTTTCTTCACTCTCCCTTTACCTCTCTTCTCCACCACATACCGCAGAGCCATCAAGGCAAGAACAAAGGTGGCAGAGGCACTAACGTTGGTAGTGAGGCAGAGGAGAGAAGAGTATAATGAAGGGAAAGAGAAAAAGAGTGACATGCTAGGGGCACTATTGGCCTCTGGTGACCACTTTTCCGACGAGCAAATAGTGGATTTTTTGTTGGCTTTGCTCGTCGCCGGTTACGAGACCACCTCTACCATAATGACTCTTGCAGTCAAGTTCCTCACTGAGACTCCTCTGGCCCTGGCACAGCTCAAGGAAGAACATGACCAAATCAGAGCAAGGAGTGACCCAGGGGCACCACTGGAATGGACGGATTACAAGTCAATGGTTTTTACCCAATGTGTTGTGAATGAGACCTTGAGGGTGGCTAACATAATTGGTGGGATATTTAGAAGAGCAACAACAGACATCAACATAAAAGGTTACACTATTCCTAAGGGATGGAAGGTCTTTGCATCATTTCGTGCTGTACATCTGAATCCTGAATATTACAAAGATGCACGCACCTTCAATCCCTGGAGATGGCAGAGTAACTCATCAGAAGCAGCAAACCCGGGGAATGTTTATACACCTTTTGGGGGAGGGCCACGGTTGTGCCCTGGTTATGAGCTAGCCAGAGTTGTACTTTCTGTCTTCCTTCACCGCATTGTCACCCGCTTTAGTTGGGTTCCTGCCGAGGAAGATAAGTTGGTGTTTTTCCCAACAACTAGGACGCAGAAGAGGTATCCCATTATTGTGAAGCATAGAAGTGCAAACCATGTATAG	1425	0.5018	MVSLPTLLLLIAAFAAAMFLRRALNRRKFRLPPGSYGLPFIGETLQLISAYKSSNPEPFMDERVRRYGSIFTTHVFGEPTVFSADPELNRFILQNEGKLLDCSYPGSISNLLGKHSLLLMKGALHKRMHSLTMSFANSSIIKDHLLHHIDRLIGLNLDTWSDRVTLMDQAKKITFELTVKQLMSFDPDEWTESLRKEYVLVIEGFFTLPLPLFSTTYRRAIKARTKVAEALTLVVRQRREEYNEGKEKKSDMLGALLASGDHFSDEQIVDFLLALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDQIRARSDPGAPLEWTDYKSMVFTQCVVNETLRVANIIGGIFRRATTDINIKGYTIPKGWKVFASFRAVHLNPEYYKDARTFNPWRWQSNSSEAANPGNVYTPFGGGPRLCPGYELARVVLSVFLHRIVTRFSWVPAEEDKLVFFPTTRTQKRYPIIVKHRSANHV*	475

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pvu1g2504	474	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	412	421	IPR017972	GO:0005506\|GO:0016705
Pvu1g2504	474	PANTHER	CYTOCHROME P450 90A1	9	468	-	-
Pvu1g2504	474	SUPERFAMILY	Cytochrome P450	24	469	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu1g2504	474	Pfam	Cytochrome P450	32	450	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu1g2504	474	PRINTS	P450 superfamily signature	278	295	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu1g2504	474	PRINTS	P450 superfamily signature	334	345	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu1g2504	474	PRINTS	P450 superfamily signature	410	419	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu1g2504	474	PRINTS	P450 superfamily signature	419	430	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu1g2504	474	PRINTS	E-class P450 group I signature	64	83	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Pvu1g2504	474	PRINTS	E-class P450 group I signature	267	284	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu1g2504	Pvu-Chr1	50180058	50185697	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu1g2504	120	469	Cytochrome P450	AT5G05690	80.857	0.0	571

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu1g2504	K09588		-	gmx:100795125	853.973

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu1g2504	1	50180058	50185697	Pvu1g2504	1	50180058	50185697	ECH
	Pvu1g2504	1	50180058	50185697	Pvu8g2323	8	53786254	53790992	PCT

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