Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2503 ATGGCCGCCATCGCCGCCACCACATCATACCTCTTCGGCACCCAGCTCTACACCCCGACAACCTTAAACACCGGAAGATTCCACGCGCTCTTCAACTTCGGCACCAAGAAGACGCCGCCGCCGCCAAAGAAAAAGGAAGTGAAAGTGAAACCCGTCTCCGGCGATCGGCTGGTGTGGTTCCCGAAGGCGGATCCGCCGGAGTGGCTCGACGGAAGCATGATCGGCGACCGCGGGTTCGACCCGTTCGGATTTGCAAGGCCCGCGGAGTACCTGCAGTTCGACCTGGACTCGCTGGACCAGAACCTCGCGAAGAACCTCGCTGGCGACGTGATAGGAACAAGGGTGGAGGTCGCAGAGGTCAAACCGACGCCGTTTCAGCCCTACACGGAGGTTTTCGGGATTCAGAGGTTCCGCGAGTGCGAAGTCATTCACGGAAGGTGGGCAATGCTGGGTGCACTCGGTGCTTTGGCCGTTGAGGCTCTCACCGGAGTCGCATGGCAAGACGCCGGAAAGGTAGAGCTGGTGGAAGGATCATCTTACTTGGGACTTCCACTTCCATTTTCATTGAGCACACTGATATGGATCGAGGTGATAGTGATAGGATACATAGAGTTTCAAAGAAATGCAGAACTTGACCCAGAGAAAAGGTTGTACCCAGGAGGCAAGTTCTTTGATCCTCTGGGTTTGGCCGTCGACCCTGATGAAAAAGCCAGACTTCAACTTGCAGAGATCAAGCATTCCCGGTTGGCCATGCTCGTCTTCCTCATCTTTGCCATTCAAGCTGCTGTAACAGGAAAAGGCCCTATCAGTTTTATTGCTACCTTCAACAAGTGA 834 0.5492 MAAIAATTSYLFGTQLYTPTTLNTGRFHALFNFGTKKTPPPPKKKEVKVKPVSGDRLVWFPKADPPEWLDGSMIGDRGFDPFGFARPAEYLQFDLDSLDQNLAKNLAGDVIGTRVEVAEVKPTPFQPYTEVFGIQRFRECEVIHGRWAMLGALGALAVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLSTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAVDPDEKARLQLAEIKHSRLAMLVFLIFAIQAAVTGKGPISFIATFNK* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2503 277 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 3 277 - -
Pvu1g2503 277 Pfam Chlorophyll A-B binding protein 65 261 IPR022796 -
Pvu1g2503 277 SUPERFAMILY Chlorophyll a-b binding protein 55 274 - -
Pvu1g2503 277 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 277 IPR001344 GO:0009765|GO:0016020
Pvu1g2503 277 Gene3D Chlorophyll a/b binding protein domain 58 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2503 Pvu-Chr1 50163736 50165948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2503 11 274 Chloroplast and Mitochondria Gene Families AT3G08940 71.212 3.81e-136 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2503 K08915 - gmx:100820335 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2503 1 50163736 50165948 Pvu1g2503 1 50163736 50165948 ECH