Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2492 ATGGAAGAGGGCATGTCAGATTTTTGTTTCAGAGGTGAAAATGTTGGTTGTAATAGAGGTAGTGGTAGTGGTACCAAGTGTGGGCGTTGGAATCCCACAACTGAGCAGGCTAAGGTTCTGACTCAACTGTTCAGTTCTGGACTTCGAAACCCAAGCATTGATCAGATTCAAAAGATCTCTAATCAGCTCAGTTTTTATGGTAAGATTGAGAGCAAAAATGTGTTCTATTGGTTTCAGAACCATAAGGCCAGGGAAAGACAAAAGCGTCGCAAGGTTGATAGGGATGTGACTCGTAGTGAAAACTCTATCTCCATTAATTTTTTCACACAAAATTTTACTCAGCTATATGACGTTTCTGAGACTGAGAAAGTCACTGAGACCCTTCAACTGTTCCCCCTGAACTCTTTTTGTGAATCAGAATCAGAGAATATGAGGGTTCATGCAAGTGACTGCAGGAATAATACAGTGTTTTCTTTCACAGAGGAGGAACAAATGAATCATTCACCATTAGATCTTCGCTTGAGTTTCACGTGA 534 0.4064 MEEGMSDFCFRGENVGCNRGSGSGTKCGRWNPTTEQAKVLTQLFSSGLRNPSIDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQKRRKVDRDVTRSENSISINFFTQNFTQLYDVSETEKVTETLQLFPLNSFCESESENMRVHASDCRNNTVFSFTEEEQMNHSPLDLRLSFT* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2492 177 Gene3D - 26 93 - -
Pvu1g2492 177 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Pvu1g2492 177 SUPERFAMILY Homeodomain-like 28 90 IPR009057 -
Pvu1g2492 177 CDD homeodomain 29 89 IPR001356 GO:0003677
Pvu1g2492 177 SMART HOX_1 25 92 IPR001356 GO:0003677
Pvu1g2492 177 Pfam Homeodomain 27 87 IPR001356 GO:0003677
Pvu1g2492 177 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 165 - -
Pvu1g2492 177 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 165 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2492 Pvu-Chr1 50087033 50087793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2492 8 176 Wox Gene Family AT3G11260 53.005 3.55e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pvu1g2492 Homeodomain 1.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2492 - - vra:106757015 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2492 1 50087033 50087793 Pvu8g2338 8 53922329 53923714 ECH
Pvu1g2492 1 50087033 50087793 Pvu1g2492 1 50087033 50087793 ECH
Pvu1g2492 1 50087033 50087793 Pvu8g2338 8 53922329 53923714 PCT