Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2490 ATGTCTTCTCCATCTTCTCCTTGTGATTCAGTCACAGTGATTTCAAAATGCAAAGTTGTCCCTCTGAAGAACTCCACTGTGGGAGATCTGAAACTCTCAATCTCAGACCTTAACATGCTCTTATGTCACTACATCCAAAAGGGGTGTCTCTTCACCACCCCATCTCCACCGTCTCAACCTCTCATCCCTCATCTCACCAAAGCACTATCCCACACACTCTCCCTTTTCCCTCCCTTTGCAGGTCGCCTCAAAACTGATGTTGACGGCTACGTCTACATCGCATGCAACGACGCTGGCGTCGATCTCATCCACGCCACCGCCACTCATATCTCCGTCGCCGACCTCCTGTCGTCGTCCGATGTTCATCCAACCGTCAAGCACCTCTTCCCTTTCCACCACAAAATTAGCTACGCTGCTCATTCTTCCCCTATCATGGCCTTTCAGGTCACCGAACTCGCTGACGGCGTTTTCGTCGGTTGTGCTGTCTGTCACGCCGTCACCGACGGTGCCACCTTCTGGAACTTCTTTAACACTTTCGCCGCCATTTCGCGAGGAGAAACCGCTTGTCCCTCCAGGCTCCCGGATTTTCGTCGGGATTCCATCCTCTCCTCGAACGTCGTGCTTCGACTGCCAAAAGAAATCAAGGTCACCTTCAATGTTGACGCGCCGTTTCGCGAGAAAATTTTCAGTTTCAGCCGTGAATCAATTCAGAAGCTGAAAGCCTCGGTGAACAGCAGCATGTTTACGGCGGAGAACGTTGATGTGGCGGATGAGTTGACGGCGAAACTGAACGGCGACACAGAACTGAAAACAGCTAGCGAAGGCGTAAGGGGTGAAAGAACAGAGATTTCTTCGTTCCAATCGTTGTGCGCACTGATGTGGAAGGTGGTGACGAGGGCGAGGAATATGGAGAAGTCTAAAATGACGTCGTTTCGAACGGCTGTTAATATTCGGAAACGCATGAAGCCCGAGTTGGAGGACTGTTACTTCGGAAATGCGCTTCAGAGCATTACGACGTGTGCAAAGGTGGGTGATGTGGTGTCGAAGGACCTTCCATGGTGCGCAGAGCAACTGAATAGGAGCGTGAAGGCGTTTGATAGCGCTACGGTGCAGCGCAATGTGGAGAATTGGGAGAGTGATCCCAAGTGCTACGAGTTAGGGAACCATGACGGCGCCACTGTGCAGATGGGAAGCTCGCCAAGATTTCCGATGTATGACAACGATTTTGGATGGGGGCGGCCCGTAACCGTGCGGAGCGGCGGAGCAAACAAGTTTGACGGTAAGTTGTCGGCGTTTCCCGGGAGTAGTGGCGGTGGCAGCGTGGATGTGGAGGTGGTTTTGGCGGCTGAAACAATGGCGCAACTGGAGTCCGATCCTGAATTCATGGTTTACTCTCATGGGTAA 1404 0.5235 MSSPSSPCDSVTVISKCKVVPLKNSTVGDLKLSISDLNMLLCHYIQKGCLFTTPSPPSQPLIPHLTKALSHTLSLFPPFAGRLKTDVDGYVYIACNDAGVDLIHATATHISVADLLSSSDVHPTVKHLFPFHHKISYAAHSSPIMAFQVTELADGVFVGCAVCHAVTDGATFWNFFNTFAAISRGETACPSRLPDFRRDSILSSNVVLRLPKEIKVTFNVDAPFREKIFSFSRESIQKLKASVNSSMFTAENVDVADELTAKLNGDTELKTASEGVRGERTEISSFQSLCALMWKVVTRARNMEKSKMTSFRTAVNIRKRMKPELEDCYFGNALQSITTCAKVGDVVSKDLPWCAEQLNRSVKAFDSATVQRNVENWESDPKCYELGNHDGATVQMGSSPRFPMYDNDFGWGRPVTVRSGGANKFDGKLSAFPGSSGGGSVDVEVVLAAETMAQLESDPEFMVYSHG* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2490 467 Pfam Transferase family 10 462 - -
Pvu1g2490 467 Gene3D - 224 460 IPR023213 -
Pvu1g2490 467 Gene3D - 10 215 IPR023213 -
Pvu1g2490 467 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 9 464 - -
Pvu1g2490 467 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2490 Pvu-Chr1 50073685 50076009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2490 35 456 Monolignol Biosynthesis Gene Families AT5G48930 28.571 4.04e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2490 - - vra:106757796 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2490 1 50073685 50076009 Pvu1g2490 1 50073685 50076009 ECH
Pvu1g2490 1 50073685 50076009 Pvu8g2339 8 53934137 53935591 ECH
Pvu8g2339 8 53934137 53935591 Pvu1g2490 1 50073685 50076009 PCT