Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2487 ATGTCGGAGGCTTTGATCAATGGATTGGCCGGAGCTGGAGGAGGGATCATTGCTCAGCTCATCACATACCCACTTTCAACTGTAAACACTCGTCAACAAACCGAGCGTGATCCGAAGAGAGCGACGAGGAATCAAGGTGCCCTCGAACGAATGTGCAAGGTTGTAAAAGAAGAAGGGTGGGGACGATTGTATGGAGGCTTGACGCCATCTCTAGTGGGTACCGCTGCGTCTCAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACATGGCTGCAGAAGCTGCGGTACAGAAAAAGAAAAAGGGTGTCGGTGATGGATCAATTGGGATGCTCTCCTCTCTCCTCACTGCTGCTTTATCCGGGTGTGTTAACGTGCTCTTGACAAATCCCATTTGGGTAGTTGTTACCCGTATGCAGGCACATAGAAAAGGGTCGAACCATGCACCTGATGAGGGTTTGTTAGTTGCCACTGAGCAAGCAATTATTCCTGCAGTTGAACCTCTTCCTTATGGAACTAGCCATGTGATCGAAGAAATCTTTGATGAAGCTGGTATTCGGGGTTTCTGGAAAGGTGTATTACCATCATTGATCATGGTAAGCAATCCTTCCATGCAATTCATGCTGTATGAAGCCATGTTGTCAAAGTTAAGAAAAAGAAATAATAGCAACAGGGTAACTGCGTTACAGATATTTCTTCTTGGAGCTTTGGCTAAGCTTGGAGCTACTGTTGTAACTTATCCTCTTCTAGTTGTAAAGGCGAGGCTCCAGGCTAGACAGGATAAAACAGGAGACAGGAGACAGCATTACAAAGGTACTTGGGATGCTATTATTAAAATGATTCGCTATGAGGGGTTGAATGGGTTTTACAAAGGTATGGGAACAAAAATTGTACAAAGTGTGCTTGCTGCTGCTGTTATATTCACTATAAAAGAAGAACTGGTTAGGGGGGTTCACTTCTTGCTTGCCAAGGAAGCTGCCAAAACTGTAAAGCAAAAGCGTGTGTGA 1008 0.4454 MSEALINGLAGAGGGIIAQLITYPLSTVNTRQQTERDPKRATRNQGALERMCKVVKEEGWGRLYGGLTPSLVGTAASQGVYYYFYQIFRNMAAEAAVQKKKKGVGDGSIGMLSSLLTAALSGCVNVLLTNPIWVVVTRMQAHRKGSNHAPDEGLLVATEQAIIPAVEPLPYGTSHVIEEIFDEAGIRGFWKGVLPSLIMVSNPSMQFMLYEAMLSKLRKRNNSNRVTALQIFLLGALAKLGATVVTYPLLVVKARLQARQDKTGDRRQHYKGTWDAIIKMIRYEGLNGFYKGMGTKIVQSVLAAAVIFTIKEELVRGVHFLLAKEAAKTVKQKRV* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2487 335 Gene3D Mitochondrial carrier domain 7 324 IPR023395 -
Pvu1g2487 335 SUPERFAMILY Mitochondrial carrier 4 313 IPR023395 -
Pvu1g2487 335 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 333 IPR044712 GO:0006862|GO:0055085
Pvu1g2487 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Pvu1g2487 335 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 333 - -
Pvu1g2487 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 317 IPR018108 -
Pvu1g2487 335 Pfam Mitochondrial carrier protein 6 92 IPR018108 -
Pvu1g2487 335 Pfam Mitochondrial carrier protein 108 220 IPR018108 -
Pvu1g2487 335 Pfam Mitochondrial carrier protein 226 316 IPR018108 -
Pvu1g2487 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 216 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2487 Pvu-Chr1 50042088 50046713 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2487 24 334 Chloroplast and Mitochondria Gene Families AT1G25380 27.129 5.83e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2487 K13354 - gmx:100775784 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2487 1 50042088 50046713 Pvu1g2487 1 50042088 50046713 ECH