Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2448 ATGAAGGCGCTGATTTTGGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCCATGATTCTGCATCAGATAGAGGCTCTCAAGGCCATTGGAGTCGATGAAGTGGTACTAGCTATTAATTACCAACCAGAGGTTATGTTGAATTTCTTGAAGGAATTTGAGGCAAAACTTGGCATCAAAATCACTTGTTCTCAAGAAACTGAACCACTGGGTACTGCAGGCCCCTTGGCTCTTGCTAGGGATAAGCTGGTAGATGCCTCTGGAGAGCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTATCCACTTAAACAAATGATTGCATTCCACAAATCCCATGGAGGAGAGGCTTCCATAATGGTGACAAAGGTAACTAAGTTGAGACAATTTATA 438 0.4292 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYQPEVMLNFLKEFEAKLGIKITCSQETEPLGTAGPLALARDKLVDASGEPFFVLNSDVISEYPLKQMIAFHKSHGGEASIMVTKVTKLRQFI 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2448 146 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 141 IPR029044 -
Pvu1g2448 146 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 141 - -
Pvu1g2448 146 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 145 IPR029044 -
Pvu1g2448 146 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED 1 141 - -
Pvu1g2448 146 Pfam Nucleotidyl transferase 2 141 IPR005835 GO:0009058|GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2448 Pvu-Chr1 49711600 49714735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2448 1 126 Eukaryotic Initiation Factors Gene Family AT4G18300 24.242 1.17e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2448 K00966 - jre:109019608 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2448 1 49711600 49714735 Pvu1g2448 1 49711600 49714735 ECH
Pvu1g2448 1 49711600 49714735 Pvu8g2385 8 54518859 54522165 PCT